Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2671 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCAGCTTCTTACTACATACACAGGGGAGGAGGCGTCGGAGGGTCGGGATCAGGGCTTCCGAATGCTGGATCGCACGCCTCCCCTGTATTCCGGCCAATGGCCAACCAGGGCGTTTTGGCTCACTCAAATCTTAGAGGTAACTCAGTTGGATCAACGTATACAATTGAGCCCTCACATTCAAATTATCTCCGTGGGATGAGTATCAATGTCTCAGCTGGAGTTAACTCTGGTGAACCTATAAAGAAGAAGAGAGGGAGGCCCCGGAAGTATGCTCCAGACGGGCAGGTCTCATTGGGTCTGTCGCCCATGTCTGCTGGTTCAAAGCTCACTCCAGGTTCGAATTCGTCAACCCCGAGACGACGAAGAGGGCGGCCTCCGGGTTCTGGAAGGAAACAACAATTAGCTCTCCTTGGTGAGTGGATGAACAGTTCAGCTGGACTAGCTTTTGCCCCACATGTCATTCATGTTGGAGCTGGAGAAGACATTGTAGCAAAAGTATTGTCATTCGCGCAGCAGAGACCAAGGGCTGTTTGTGTCCTGTCAGGCCATGGTACTGTTTCTTCTGTAACACTGCGTCAGCCTGCATCTACTGGCGTGAGCGTCACATATGAGGGTCATTTCCAGATATTGTGCTTGTCTGGTTCTTACTTGGTGGCTGAAGATGGCGGTCCTCGAAGTAGGACAGGTGGTATTAGTGTTTCCCTCTCTAGTCCCGATGGTCATGTCGTCGGTGGTGGTGTTGCTGTTCTTACAGCAGCTGGCCCTGTTCAGGTAGTTGTGTGTAGTTTTGTTTATGGTGCAAAGATCAAGAACAAGCAAGTGGGTGGTCCGAGAAGCAACGATGGTTCCGAAACTGAGCACCACGATAATTTGGTTTCACCCTCCAGTGCCCCATCCGCGCAAACCTACAATCCATCTGCAATAGGTGTTTGGCCTGGTTCCCGTTCGGTCGACGTGAGAAACCCCCACACTGGAATTGACTTGACGCGGGGATGA 1032 51.74 MDGREGMALSGGSASYYIHRGGGVGGSGSGLPNAGSHASPVFRPMANQGVLAHSNLRGNSVGSTYTIEPSHSNYLRGMSINVSAGVNSGEPIKKKRGRPRKYAPDGQVSLGLSPMSAGSKLTPGSNSSTPRRRRGRPPGSGRKQQLALLGEWMNSSAGLAFAPHVIHVGAGEDIVAKVLSFAQQRPRAVCVLSGHGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRSRTGGISVSLSSPDGHVVGGGVAVLTAAGPVQVVVCSFVYGAKIKNKQVGGPRSNDGSETEHHDNLVSPSSAPSAQTYNPSAIGVWPGSRSVDVRNPHTGIDLTRG 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28422144 28432069 + MC06g2091 Mch6g2671 692118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2671 343 ProSiteProfiles PPC domain profile profile. 155 299 IPR005175 -
Mch6g2671 343 MobiDBLite consensus disorder prediction 85 143 - -
Mch6g2671 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 277 - -
Mch6g2671 343 MobiDBLite consensus disorder prediction 301 321 - -
Mch6g2671 343 MobiDBLite consensus disorder prediction 285 321 - -
Mch6g2671 343 Gene3D - 163 287 - -
Mch6g2671 343 MobiDBLite consensus disorder prediction 112 133 - -
Mch6g2671 343 CDD DUF296 163 275 IPR005175 -
Mch6g2671 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 305 IPR039605 GO:0003680(InterPro)
Mch6g2671 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2671 Mch-Chr6:28422144 Mch7g0683 Mch-Chr7:11542434 1.51E-96 dispersed
Mch6g2671 Mch-Chr6:28422144 Mch6g2172 Mch-Chr6:24087948 1.06E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2671 - - - 0.0