Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2674 ATGTTGCCATGGCGGATGCGCTCGCCGGAGGCGGCGGGGGAGGCGAGATCGGCGAAGGCCGTGCTCTGTATTTCCGGCATGAATTGCTCTGCTTGCGCTGTTTCTGTGGAGAATTCCATCAAACACCTTCCAGGCATTCTCGACGCCGCCGTTGATTTCTTGAACGATAGGGCTCAGATCCTCTATCTCCCAAATCTCATCGACGAAGAGTCAATACTCGAAGCAATTGAAAATGCTGGATTTCAAGCTACACTATCGAAGGACGGTACCGATCATCGATCGAGAGAAGTATGTCGAATCCGAATAAATGGGATGGGCTGCACTTCTTGTTCTTCCATGGTAGAGTCAGTTTTGGAAGCAATGTATGGAGTACAAAAGGCTCACATTGCTCTTTTGAAAGAGGAAGCAGAAGTTCACTATGATCCAAAAGTTGTTAACTGCACTCAGCTCATCATTGCCATAGAAGATATTGGGTTTGAGCCCTTACTCATAACCATTGCTGATCACATAAGCAAGATTGAGCTCAAGGTTGATGGTATGCATAATGAGAACTCATCAACAAAAGTTAAAGAATCGCTCGAATTGGTCCCGGGAGTTGAAGACGTTGATATCGATAGGACACTGAGCAAAGTTACCATATCTTACCGACCTGACATAACAGGACCTAGAACTTTCATTGAAGTGCTCGAGTCGATCAAATCCGAGCATTTTGAAACAACTATATATTCTGAAGAAGCGAGACGAGAAACTCGTAAGGAGAAAGAAATTAAGCAGCATTATAAGTACTTCTTGTGGAGTTCTGCTCTTTCCATTCCTGTTTTCTTAACATCAATGGTGTTTATGTATATACCTGGAATTAAGCAGACTTTGGATATCAAAGTAGTCAATATGATGACGGTGGGGCAGATTATCCGGTGGAATTTGTCGACTCCGGTGCAGTTCATCATCGGCTGGAGATTTTACGTTGGATCGTATAAAGCGTTACGCCGTGGTTTTGCCAATATGGATGTATTGATTACTTTGGGGACAAATGCAGCTTACTTTTATTCAGTCTACATTGTGTTGAGAGCAGCTACATCCCCTGCTTTCAATGGAACAGATTTCTTTGAGACTAGTTCAATGTTGATAACATTCATTCTACTTGGCAAGTATTTGGAGGTTTTGGCAAAGGGAAAGACCTCTGAGGCCATTGCGAAGCTTAAGCACTTGGCTCCAGAGATGGCGACGCTCTTGACTTCGGATGGCCATGGGAACGTGATCGGCGAAGCGGAAATCAGAAGTGAGTTGATTCAAAAGAATGATGTTGTCAAGGTTACTCCAGGGGCAAAAGTAGCTTCTGATGGTCTTGTGGTATGGGGAGAAAGTCATGTCAATGAGAGCATGATCACTGGAGAAGCAAGACCGGTAGCGAAAAGGACGGGCGACAAGGTGATCGGAGGAACTGTGAATGAGAACGGGGTATTGCATATAAAGGCAACACACGTCGGATCAGAGAGTTCACTTGCGCAAATCGTTCGACTCGTTGAATCGTCCCAGTTGGCAAAAGCTCCTATTCAGAAATTTGCAGACCAAATTTCCAAGTACTTTGTGCCTCTGGTGATTTCACTTTCTTTTCTCACTTGGATTTCCTGGTTATTAGCTGGAAAGTTGCACCTCTATCCAAAGTCCTGGTTGCCTTCTTCAATGGACAGTTTTGAGCTTGCTCTCCAATTTGGGATTTCCGTTATGGTCATAGCTTGTCCTTGTGCCCTCGGCCTCGCCACCCCGACTGCCGTTATGGTTGGTACCGGTGTTGGTGCATCTCAGGGAGTACTAATCAAAGGTGGTCAAGCATTAGAATTCGCGCATAAGGTGAGCTGCATTGTGTTTGACAAGACTGGAACTCTAACAATTGGAAAGCCAGTAGTTGTGAATACAAAACTTATGGACTCTATAGCACTTGAAGAACTCCTTGAACTCACAGCTGCAACCGAGGTGAACAGTGAGCACCCAGTAGCCAAGGCCATTGTTGAATATGCCAAGCAAATCAAGGGAGAACAGAACAACACCATTTGGCCAGAAGCTCAGGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCACTATAAGGAACAGGAAAATAATGGTTGGAAACAAGAGCTTGATGATGAAAAATGCCATCGAAATTCCGGGGGAAGCGGAAAGCTTTCTCGTGGACGCAGAAAGTATGGCGCAAACTGCGGTTCTGGTGGCCGTGGATCGGGAGGTGGCGGGCGCTATCGCCGTGTCCGATCCGCTGAAACCGGGTGCCAAAGAAGTGATCTCCATTCTCAAGTCTATGGAAGTGAAGAGCGTGATGGTAACAGGGGACAATTGGGGTACTGCAAATTCCATTGCCAAAGAAGTTGGAATTGAAACAGTCATAGCAGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGGCGACGGGGCACACGGTGGCGATGGTGGGGGATGGGATCAACGACTCGCCCGCCCTAGTGGCAGCGGATGTCGGGATGGCGATCGGAGCTGGTACCGACATCGCCATTGAGGCAGCAGACATTGTTCTAATAAAAAGTGACTTACAGGATGTTATAACTGCAATTCATCTTTCCAGAAAGACCTTTGCTAGAATCCGCTTGAATTACATTTGGGCTCTCGGTTATAATCTTCTCGCCATTCCAATCGCCGCGGGCGTCCTCTTCCCGTCGACTCGGTTTCGGTTGCCGCCGTGGGTTGCCGGAGCAGCCATGGCAGCCTCTTCTGTAAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACCAGAGACCCAAAAGGCTGGAGGAAGTTGAGACTCAGATGAATGGAATAGTGGTTGAATGA 2877 46.72 MLPWRMRSPEAAGEARSAKAVLCISGMNCSACAVSVENSIKHLPGILDAAVDFLNDRAQILYLPNLIDEESILEAIENAGFQATLSKDGTDHRSREVCRIRINGMGCTSCSSMVESVLEAMYGVQKAHIALLKEEAEVHYDPKVVNCTQLIIAIEDIGFEPLLITIADHISKIELKVDGMHNENSSTKVKESLELVPGVEDVDIDRTLSKVTISYRPDITGPRTFIEVLESIKSEHFETTIYSEEARRETRKEKEIKQHYKYFLWSSALSIPVFLTSMVFMYIPGIKQTLDIKVVNMMTVGQIIRWNLSTPVQFIIGWRFYVGSYKALRRGFANMDVLITLGTNAAYFYSVYIVLRAATSPAFNGTDFFETSSMLITFILLGKYLEVLAKGKTSEAIAKLKHLAPEMATLLTSDGHGNVIGEAEIRSELIQKNDVVKVTPGAKVASDGLVVWGESHVNESMITGEARPVAKRTGDKVIGGTVNENGVLHIKATHVGSESSLAQIVRLVESSQLAKAPIQKFADQISKYFVPLVISLSFLTWISWLLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKVSCIVFDKTGTLTIGKPVVVNTKLMDSIALEELLELTAATEVNSEHPVAKAIVEYAKQIKGEQNNTIWPEAQEFISIPGHGVEATIRNRKIMVGNKSLMMKNAIEIPGEAESFLVDAESMAQTAVLVAVDREVAGAIAVSDPLKPGAKEVISILKSMEVKSVMVTGDNWGTANSIAKEVGIETVIAEAKPQQKAEEVKNLQATGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSDLQDVITAIHLSRKTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWVAGAAMAASSVSVVCSSLMLKKYQRPKRLEEVETQMNGIVVE 958
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 28440276 28448827 - MC06g2094 Mch6g2674 692121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2674 958 ProSiteProfiles Heavy-metal-associated domain profile. 18 84 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 Gene3D - 172 241 - -
Mch6g2674 958 ProSitePatterns Heavy-metal-associated domain. 102 132 IPR017969 GO:0046872(InterPro)
Mch6g2674 958 SFLD C1.7: P-type atpase like 604 879 - -
Mch6g2674 958 Gene3D - 12 86 - -
Mch6g2674 958 Gene3D - 91 163 - -
Mch6g2674 958 NCBIfam HAD-IC family P-type ATPase 375 909 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g2674 958 SUPERFAMILY HMA, heavy metal-associated domain 96 164 IPR036163 GO:0046872(InterPro)
Mch6g2674 958 CDD P-type_ATPase_Cu-like 263 923 - -
Mch6g2674 958 Gene3D - 589 884 IPR023214 -
Mch6g2674 958 SUPERFAMILY Calcium ATPase, transduction domain A 423 508 IPR008250 -
Mch6g2674 958 ProSitePatterns E1-E2 ATPases phosphorylation site. 624 630 IPR018303 -
Mch6g2674 958 PRINTS H+-transporting ATPase (proton pump) signature 827 843 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g2674 958 PRINTS H+-transporting ATPase (proton pump) signature 858 883 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g2674 958 CDD HMA 100 161 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 ProSiteProfiles Heavy-metal-associated domain profile. 96 162 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 SUPERFAMILY HMA, heavy metal-associated domain 166 233 IPR036163 GO:0046872(InterPro)
Mch6g2674 958 CDD HMA 174 240 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 FunFam Copper-transporting ATPase HMA5 17 88 - -
Mch6g2674 958 FunFam Copper-transporting ATPase 1, putative 390 512 - -
Mch6g2674 958 FunFam ATPase copper transporting beta 92 165 - -
Mch6g2674 958 ProSitePatterns Heavy-metal-associated domain. 24 53 IPR017969 GO:0046872(InterPro)
Mch6g2674 958 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 12 951 - -
Mch6g2674 958 Pfam E1-E2 ATPase 403 600 - -
Mch6g2674 958 SUPERFAMILY HAD-like 621 933 IPR036412 -
Mch6g2674 958 FunFam Probable copper-transporting ATPase HMA5 730 884 - -
Mch6g2674 958 SUPERFAMILY Calcium ATPase, transmembrane domain M 367 902 IPR023298 -
Mch6g2674 958 ProSiteProfiles Heavy-metal-associated domain profile. 171 237 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 Pfam haloacid dehalogenase-like hydrolase 619 841 - -
Mch6g2674 958 NCBIfam heavy metal translocating P-type ATPase 335 936 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Mch6g2674 958 SUPERFAMILY HMA, heavy metal-associated domain 17 87 IPR036163 GO:0046872(InterPro)
Mch6g2674 958 Pfam Heavy-metal-associated domain 100 160 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 Pfam Heavy-metal-associated domain 175 233 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 Pfam Heavy-metal-associated domain 24 81 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 774 784 - -
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 622 636 - -
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 827 846 - -
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 752 763 - -
Mch6g2674 958 PRINTS P-type cation-transporting ATPase superfamily signature 850 862 - -
Mch6g2674 958 Gene3D - 390 512 - -
Mch6g2674 958 SFLD p-type atpase 604 879 IPR044492 -
Mch6g2674 958 CDD HMA 24 84 IPR006121 GO:0046872(InterPro)
Mch6g2674 958 Gene3D - 629 707 IPR023299 GO:0000166(InterPro)
Mch6g2674 958 Gene3D - 708 758 IPR023299 GO:0000166(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0531 Mch-Chr1:9587324 Mch6g2674 Mch-Chr6:28440276 0 dispersed
Mch1g2141 Mch-Chr1:20620979 Mch6g2674 Mch-Chr6:28440276 6.92E-280 dispersed
Mch2g0132 Mch-Chr2:1008161 Mch6g2674 Mch-Chr6:28440276 4.67e-313 dispersed
Mch6g0507 Mch-Chr6:3382907 Mch6g2674 Mch-Chr6:28440276 1.43E-68 dispersed
Mch6g2674 Mch-Chr6:28440276 Mch8g2630 Mch-Chr8:29545688 1.32E-70 dispersed
Mch6g2674 Mch-Chr6:28440276 Mch2g1310 Mch-Chr2:9270897 2.35E-303 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2674 K17686 - csv:101220448 1625.53