Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2674 | ATGTTGCCATGGCGGATGCGCTCGCCGGAGGCGGCGGGGGAGGCGAGATCGGCGAAGGCCGTGCTCTGTATTTCCGGCATGAATTGCTCTGCTTGCGCTGTTTCTGTGGAGAATTCCATCAAACACCTTCCAGGCATTCTCGACGCCGCCGTTGATTTCTTGAACGATAGGGCTCAGATCCTCTATCTCCCAAATCTCATCGACGAAGAGTCAATACTCGAAGCAATTGAAAATGCTGGATTTCAAGCTACACTATCGAAGGACGGTACCGATCATCGATCGAGAGAAGTATGTCGAATCCGAATAAATGGGATGGGCTGCACTTCTTGTTCTTCCATGGTAGAGTCAGTTTTGGAAGCAATGTATGGAGTACAAAAGGCTCACATTGCTCTTTTGAAAGAGGAAGCAGAAGTTCACTATGATCCAAAAGTTGTTAACTGCACTCAGCTCATCATTGCCATAGAAGATATTGGGTTTGAGCCCTTACTCATAACCATTGCTGATCACATAAGCAAGATTGAGCTCAAGGTTGATGGTATGCATAATGAGAACTCATCAACAAAAGTTAAAGAATCGCTCGAATTGGTCCCGGGAGTTGAAGACGTTGATATCGATAGGACACTGAGCAAAGTTACCATATCTTACCGACCTGACATAACAGGACCTAGAACTTTCATTGAAGTGCTCGAGTCGATCAAATCCGAGCATTTTGAAACAACTATATATTCTGAAGAAGCGAGACGAGAAACTCGTAAGGAGAAAGAAATTAAGCAGCATTATAAGTACTTCTTGTGGAGTTCTGCTCTTTCCATTCCTGTTTTCTTAACATCAATGGTGTTTATGTATATACCTGGAATTAAGCAGACTTTGGATATCAAAGTAGTCAATATGATGACGGTGGGGCAGATTATCCGGTGGAATTTGTCGACTCCGGTGCAGTTCATCATCGGCTGGAGATTTTACGTTGGATCGTATAAAGCGTTACGCCGTGGTTTTGCCAATATGGATGTATTGATTACTTTGGGGACAAATGCAGCTTACTTTTATTCAGTCTACATTGTGTTGAGAGCAGCTACATCCCCTGCTTTCAATGGAACAGATTTCTTTGAGACTAGTTCAATGTTGATAACATTCATTCTACTTGGCAAGTATTTGGAGGTTTTGGCAAAGGGAAAGACCTCTGAGGCCATTGCGAAGCTTAAGCACTTGGCTCCAGAGATGGCGACGCTCTTGACTTCGGATGGCCATGGGAACGTGATCGGCGAAGCGGAAATCAGAAGTGAGTTGATTCAAAAGAATGATGTTGTCAAGGTTACTCCAGGGGCAAAAGTAGCTTCTGATGGTCTTGTGGTATGGGGAGAAAGTCATGTCAATGAGAGCATGATCACTGGAGAAGCAAGACCGGTAGCGAAAAGGACGGGCGACAAGGTGATCGGAGGAACTGTGAATGAGAACGGGGTATTGCATATAAAGGCAACACACGTCGGATCAGAGAGTTCACTTGCGCAAATCGTTCGACTCGTTGAATCGTCCCAGTTGGCAAAAGCTCCTATTCAGAAATTTGCAGACCAAATTTCCAAGTACTTTGTGCCTCTGGTGATTTCACTTTCTTTTCTCACTTGGATTTCCTGGTTATTAGCTGGAAAGTTGCACCTCTATCCAAAGTCCTGGTTGCCTTCTTCAATGGACAGTTTTGAGCTTGCTCTCCAATTTGGGATTTCCGTTATGGTCATAGCTTGTCCTTGTGCCCTCGGCCTCGCCACCCCGACTGCCGTTATGGTTGGTACCGGTGTTGGTGCATCTCAGGGAGTACTAATCAAAGGTGGTCAAGCATTAGAATTCGCGCATAAGGTGAGCTGCATTGTGTTTGACAAGACTGGAACTCTAACAATTGGAAAGCCAGTAGTTGTGAATACAAAACTTATGGACTCTATAGCACTTGAAGAACTCCTTGAACTCACAGCTGCAACCGAGGTGAACAGTGAGCACCCAGTAGCCAAGGCCATTGTTGAATATGCCAAGCAAATCAAGGGAGAACAGAACAACACCATTTGGCCAGAAGCTCAGGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCACTATAAGGAACAGGAAAATAATGGTTGGAAACAAGAGCTTGATGATGAAAAATGCCATCGAAATTCCGGGGGAAGCGGAAAGCTTTCTCGTGGACGCAGAAAGTATGGCGCAAACTGCGGTTCTGGTGGCCGTGGATCGGGAGGTGGCGGGCGCTATCGCCGTGTCCGATCCGCTGAAACCGGGTGCCAAAGAAGTGATCTCCATTCTCAAGTCTATGGAAGTGAAGAGCGTGATGGTAACAGGGGACAATTGGGGTACTGCAAATTCCATTGCCAAAGAAGTTGGAATTGAAACAGTCATAGCAGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGGCGACGGGGCACACGGTGGCGATGGTGGGGGATGGGATCAACGACTCGCCCGCCCTAGTGGCAGCGGATGTCGGGATGGCGATCGGAGCTGGTACCGACATCGCCATTGAGGCAGCAGACATTGTTCTAATAAAAAGTGACTTACAGGATGTTATAACTGCAATTCATCTTTCCAGAAAGACCTTTGCTAGAATCCGCTTGAATTACATTTGGGCTCTCGGTTATAATCTTCTCGCCATTCCAATCGCCGCGGGCGTCCTCTTCCCGTCGACTCGGTTTCGGTTGCCGCCGTGGGTTGCCGGAGCAGCCATGGCAGCCTCTTCTGTAAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACCAGAGACCCAAAAGGCTGGAGGAAGTTGAGACTCAGATGAATGGAATAGTGGTTGAATGA | 2877 | 46.72 | MLPWRMRSPEAAGEARSAKAVLCISGMNCSACAVSVENSIKHLPGILDAAVDFLNDRAQILYLPNLIDEESILEAIENAGFQATLSKDGTDHRSREVCRIRINGMGCTSCSSMVESVLEAMYGVQKAHIALLKEEAEVHYDPKVVNCTQLIIAIEDIGFEPLLITIADHISKIELKVDGMHNENSSTKVKESLELVPGVEDVDIDRTLSKVTISYRPDITGPRTFIEVLESIKSEHFETTIYSEEARRETRKEKEIKQHYKYFLWSSALSIPVFLTSMVFMYIPGIKQTLDIKVVNMMTVGQIIRWNLSTPVQFIIGWRFYVGSYKALRRGFANMDVLITLGTNAAYFYSVYIVLRAATSPAFNGTDFFETSSMLITFILLGKYLEVLAKGKTSEAIAKLKHLAPEMATLLTSDGHGNVIGEAEIRSELIQKNDVVKVTPGAKVASDGLVVWGESHVNESMITGEARPVAKRTGDKVIGGTVNENGVLHIKATHVGSESSLAQIVRLVESSQLAKAPIQKFADQISKYFVPLVISLSFLTWISWLLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKVSCIVFDKTGTLTIGKPVVVNTKLMDSIALEELLELTAATEVNSEHPVAKAIVEYAKQIKGEQNNTIWPEAQEFISIPGHGVEATIRNRKIMVGNKSLMMKNAIEIPGEAESFLVDAESMAQTAVLVAVDREVAGAIAVSDPLKPGAKEVISILKSMEVKSVMVTGDNWGTANSIAKEVGIETVIAEAKPQQKAEEVKNLQATGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSDLQDVITAIHLSRKTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWVAGAAMAASSVSVVCSSLMLKKYQRPKRLEEVETQMNGIVVE | 958 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 28440276 | 28448827 | - | MC06g2094 | Mch6g2674 | 692121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2674 | 958 | ProSiteProfiles | Heavy-metal-associated domain profile. | 18 | 84 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Gene3D | - | 172 | 241 | - | - | |
Mch6g2674 | 958 | ProSitePatterns | Heavy-metal-associated domain. | 102 | 132 | IPR017969 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | SFLD | C1.7: P-type atpase like | 604 | 879 | - | - | |
Mch6g2674 | 958 | Gene3D | - | 12 | 86 | - | - | |
Mch6g2674 | 958 | Gene3D | - | 91 | 163 | - | - | |
Mch6g2674 | 958 | NCBIfam | HAD-IC family P-type ATPase | 375 | 909 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch6g2674 | 958 | SUPERFAMILY | HMA, heavy metal-associated domain | 96 | 164 | IPR036163 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | CDD | P-type_ATPase_Cu-like | 263 | 923 | - | - | |
Mch6g2674 | 958 | Gene3D | - | 589 | 884 | IPR023214 | - | |
Mch6g2674 | 958 | SUPERFAMILY | Calcium ATPase, transduction domain A | 423 | 508 | IPR008250 | - | |
Mch6g2674 | 958 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 624 | 630 | IPR018303 | - | |
Mch6g2674 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 827 | 843 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch6g2674 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 858 | 883 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch6g2674 | 958 | CDD | HMA | 100 | 161 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | ProSiteProfiles | Heavy-metal-associated domain profile. | 96 | 162 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | SUPERFAMILY | HMA, heavy metal-associated domain | 166 | 233 | IPR036163 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | CDD | HMA | 174 | 240 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | FunFam | Copper-transporting ATPase HMA5 | 17 | 88 | - | - | |
Mch6g2674 | 958 | FunFam | Copper-transporting ATPase 1, putative | 390 | 512 | - | - | |
Mch6g2674 | 958 | FunFam | ATPase copper transporting beta | 92 | 165 | - | - | |
Mch6g2674 | 958 | ProSitePatterns | Heavy-metal-associated domain. | 24 | 53 | IPR017969 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 12 | 951 | - | - | |
Mch6g2674 | 958 | Pfam | E1-E2 ATPase | 403 | 600 | - | - | |
Mch6g2674 | 958 | SUPERFAMILY | HAD-like | 621 | 933 | IPR036412 | - | |
Mch6g2674 | 958 | FunFam | Probable copper-transporting ATPase HMA5 | 730 | 884 | - | - | |
Mch6g2674 | 958 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 367 | 902 | IPR023298 | - | |
Mch6g2674 | 958 | ProSiteProfiles | Heavy-metal-associated domain profile. | 171 | 237 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Pfam | haloacid dehalogenase-like hydrolase | 619 | 841 | - | - | |
Mch6g2674 | 958 | NCBIfam | heavy metal translocating P-type ATPase | 335 | 936 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Mch6g2674 | 958 | SUPERFAMILY | HMA, heavy metal-associated domain | 17 | 87 | IPR036163 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Pfam | Heavy-metal-associated domain | 100 | 160 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Pfam | Heavy-metal-associated domain | 175 | 233 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Pfam | Heavy-metal-associated domain | 24 | 81 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 774 | 784 | - | - | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 622 | 636 | - | - | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 827 | 846 | - | - | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 458 | 472 | - | - | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 752 | 763 | - | - | |
Mch6g2674 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 850 | 862 | - | - | |
Mch6g2674 | 958 | Gene3D | - | 390 | 512 | - | - | |
Mch6g2674 | 958 | SFLD | p-type atpase | 604 | 879 | IPR044492 | - | |
Mch6g2674 | 958 | CDD | HMA | 24 | 84 | IPR006121 | GO:0046872(InterPro) | |
Mch6g2674 | 958 | Gene3D | - | 629 | 707 | IPR023299 | GO:0000166(InterPro) | |
Mch6g2674 | 958 | Gene3D | - | 708 | 758 | IPR023299 | GO:0000166(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0531 | Mch-Chr1:9587324 | Mch6g2674 | Mch-Chr6:28440276 | 0 | dispersed | |
Mch1g2141 | Mch-Chr1:20620979 | Mch6g2674 | Mch-Chr6:28440276 | 6.92E-280 | dispersed | |
Mch2g0132 | Mch-Chr2:1008161 | Mch6g2674 | Mch-Chr6:28440276 | 4.67e-313 | dispersed | |
Mch6g0507 | Mch-Chr6:3382907 | Mch6g2674 | Mch-Chr6:28440276 | 1.43E-68 | dispersed | |
Mch6g2674 | Mch-Chr6:28440276 | Mch8g2630 | Mch-Chr8:29545688 | 1.32E-70 | dispersed | |
Mch6g2674 | Mch-Chr6:28440276 | Mch2g1310 | Mch-Chr2:9270897 | 2.35E-303 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g2674 | K17686 | - | csv:101220448 | 1625.53 |