Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2746 ATGGATTTTCGGGGTTATAGCAGTAGACTGGAAACAAAAAACCTGAATAAAGGCTATGCTCAGGAGCAGGAATCTCTTGCTGATGATTTCATTGACGATTTTCGCTTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTTGGATATAGGCTTCTACAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATTAGAGATCCCAAACTTGGAATTGGAAAACAAGAAGAGGACGATTTTTTTACTGCAGAGGAAAACATCCAGCGAAAAAAACTTGATGTTGAGGTGGAAGAGACTGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAAGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTTGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAAAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAACAGATGCTGGATCAACAAGAAAGATCAGTCGATGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCGAAAGTAGCTACTGTGGCTTCAGTTTTTGGGAACGATAGCGATGATGAA 897 40.13 MDFRGYSSRLETKNLNKGYAQEQESLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKFAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEKEMAKFAQIADARKKQQQMLDQQERSVDAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVATVASVFGNDSDDE 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28998632 29001422 + MC06g2158 Mch6g2746 692193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2746 299 MobiDBLite consensus disorder prediction 233 267 - -
Mch6g2746 299 MobiDBLite consensus disorder prediction 191 213 - -
Mch6g2746 299 Pfam G-patch domain 63 103 IPR000467 GO:0003676(InterPro)
Mch6g2746 299 MobiDBLite consensus disorder prediction 229 267 - -
Mch6g2746 299 ProSitePatterns Zinc finger C2H2 type domain signature. 159 181 IPR013087 -
Mch6g2746 299 SMART G-patch_5 60 105 IPR000467 GO:0003676(InterPro)
Mch6g2746 299 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 299 - -
Mch6g2746 299 ProSiteProfiles G-patch domain profile. 62 107 IPR000467 GO:0003676(InterPro)
Mch6g2746 299 SUPERFAMILY beta-beta-alpha zinc fingers 138 190 IPR036236 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43667 PF01585 G-patch 1.90E-15 CL0449 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2746 - - - 0.0