Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2758 ATGGCTACTAGTGGAGATTTCTTGCCACCATTGGTTATGGTGGTTGTCCAATTCCTATACGCAGGCTTGAATATTACATCAAAGTTAGCCATGGAGTTTGGAATGAATCCACTGGTTCTAGTTGCTTACAGGCAGATGTTTGCTACAGTAGCCATAGCTCCTTGTGCCTATTGGATAGAGAGGAAAGGGAGACCCAAGATTACAAAGCCAATTTTGTTTCAGATTCTGATATGTTCCTTAACTGGGGCAACAGCAAACCAAGTCTTTTACTATGTTGGGTTAAAATATTCAACCCCCACCATCGCTTGTGCATTGACCAATGTCCTCCCAGCTGCAACTTTTGTCCTCGCTGTTCTTTTCAGACAAGAATCTGTGGCGATCAAGACAAGACCAGGTGCAGCCAAGGTGTTGGGGACTGTCGTGTGCGTTGGAGGGGCCATGTTGTTGTCGTTCTACCGTGGACAAACCATCGAGCTTGGTGAATCCGGGATCCATTGGAAGTATGCCGAGATGATGAGGGGCGGAAGCTCCAATGGCCAAGGCACAGGCAGTAGCATCTGGGGCTCTCTTTGCTTGATCATAAGCTCCGTTGCCTGGGCGGCTTGGTTTGTAATCCAAGCGAAAGTGAACGAGAAGTTTCCAGCTCCGTACACGAGCACAGCTCTCATGACTTTCATGGCAACCATTCAATGTGGAGCAATTGCCATTGGCGTCGAGCACAGGACTTTAGCAGCTTGGTCATTGAAGAGCTCAATCAGACTTGTTGGAGCTCTCTATGCAGGAGTGGCGTGCTCTGGACTTGCGTTTTGCCTAACCTCCTGGAGTATCCAAAAGAAAGGTCCTCTCTATGCCTCAGTTTTCAACCCCTTCTTGCTGGTTATCGTGGCTGTTTTCAGCTGGACCTTCTTTCAAGAAAAATTATATGTAGGAACTGTTGTAGGGTCAACGTTGATTGTCGCTGGGCTATATGCTGTCCTATGGGGAAAGACCAAAGAGGTGAAACTACAACGAGATACCGAAATGGCGGTGGCAGCAGAGGCAAAGCTAGATGACTGTAATGACAAAGATGGATTGGAAGAACAGTCCTATGTGGTTTCAAATGCCAATATTCTCCATCAA 1119 47.18 MATSGDFLPPLVMVVVQFLYAGLNITSKLAMEFGMNPLVLVAYRQMFATVAIAPCAYWIERKGRPKITKPILFQILICSLTGATANQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLFRQESVAIKTRPGAAKVLGTVVCVGGAMLLSFYRGQTIELGESGIHWKYAEMMRGGSSNGQGTGSSIWGSLCLIISSVAWAAWFVIQAKVNEKFPAPYTSTALMTFMATIQCGAIAIGVEHRTLAAWSLKSSIRLVGALYAGVACSGLAFCLTSWSIQKKGPLYASVFNPFLLVIVAVFSWTFFQEKLYVGTVVGSTLIVAGLYAVLWGKTKEVKLQRDTEMAVAAEAKLDDCNDKDGLEEQSYVVSNANILHQ 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29079888 29082052 + MC06g2167 Mch6g2758 692205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2758 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Mch6g2758 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
Mch6g2758 373 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020(InterPro)
Mch6g2758 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Mch6g2758 373 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2375 Mch-Chr6:25627950 Mch6g2758 Mch-Chr6:29079888 1.99E-67 dispersed
Mch6g2376 Mch-Chr6:25638082 Mch6g2758 Mch-Chr6:29079888 1.50E-76 dispersed
Mch6g2758 Mch-Chr6:29079888 Mch9g1707 Mch-Chr9:19031676 5.43E-79 dispersed
Mch10g0014 Mch-Chr10:102564 Mch6g2758 Mch-Chr6:29079888 3.75E-56 transposed
Mch8g1953 Mch-Chr8:21315350 Mch6g2758 Mch-Chr6:29079888 2.40E-64 transposed
Mch6g2758 Mch-Chr6:29079888 Mch8g2753 Mch-Chr8:30685804 4.66E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2758 - - - 0.0