Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2772 ATGGTTTGCGAGGATGAGGCTGTGATCCAAAAAGTGTGCGATTTGTACGCCAAAATCTGTGCCCTTGAAAGCCTCAAACCCTGCAGCCATGTGGACAGCCTCTTCACAGAGCTGGTGGTCACGTGCATCTCCCCCACCTCCCAACACTTCCAAATCTCCTCCCTTTCAACCCCTCTTCAGCAAATGAGATCAAATCTCATCCGCCTCTGCGCCAACGCTGAGTCCCTTTTGGAGTCTCATTTCTCTGATCTCTTGGCCTCCTTTGATCACCCTCTCCACCACCTCCATGTCTTCCCCTACTTCCCCAATTACCTCAAACTCTCCCTCCTTGAGTTCTCCATCCTCCGCCGCCACTGTCCCACCCCCGCCACCGTCGCCTTTGTCGGCTCCGGCCCCCTCCCCCTCACCTCCATCGTCCTCGCCACCCGCCATCTCACCTCCACCACCTTCCACAACTACGACCTCGACCCACTTGCCAATTCCAAGGCACTGAAATTGGTGTCGCTCGACCCCGACCTAAAGGCGCGGATGGTGTTCCACACGTGCGACATCTTGAGCGTCGGGGACGAGTTGAGGAAGTACGAGGTTGTGTTTTTGGCGGCGTTGGTGGGGATGGAGAAGGAGGAGAAGTTGAGGGTTATAGAGCATTTGTGGGAGTTTATGTCGGAGGGGGCTTATTTGATGGTGAGGAGTGCAAATGGAGGGAGGGCTTTTCTTTATCCAGTGGTGGATGATTGTGATTTGGTAGGGTTTGAGGTTCTGTCTGTGTTTCATCCCACAGATGAAGTGATCAATTCTGTCATAATTGCAAGAAAAAAGACAAGATTCGAGGAAAATGAGGATGATCATCAGCTGATTAGTACTATGAATAATAATAGTAACAATGGTGTTGTGGCTAATAAGTGCTGTGAGATTCAGAGCTTCAATAATAATAATCATGGAGGACTGATTGAGGAATTTGCCATGGAAGCTGCTGAGCAATTCACTTGA 990 50.61 MVCEDEAVIQKVCDLYAKICALESLKPCSHVDSLFTELVVTCISPTSQHFQISSLSTPLQQMRSNLIRLCANAESLLESHFSDLLASFDHPLHHLHVFPYFPNYLKLSLLEFSILRRHCPTPATVAFVGSGPLPLTSIVLATRHLTSTTFHNYDLDPLANSKALKLVSLDPDLKARMVFHTCDILSVGDELRKYEVVFLAALVGMEKEEKLRVIEHLWEFMSEGAYLMVRSANGGRAFLYPVVDDCDLVGFEVLSVFHPTDEVINSVIIARKKTRFEENEDDHQLISTMNNNSNNGVVANKCCEIQSFNNNNHGGLIEEFAMEAAEQFT 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29185304 29187125 - MC06g_new0592 Mch6g2772 692219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2772 329 Pfam Nicotianamine synthase protein 5 274 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Mch6g2772 329 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Mch6g2772 329 Gene3D Vaccinia Virus protein VP39 7 274 IPR029063 -
Mch6g2772 329 PANTHER NICOTIANAMINE SYNTHASE 3 5 303 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2772 Mch-Chr6:29185304 Mch8g2776 Mch-Chr8:30820127 4.94E-107 dispersed
Mch6g2772 Mch-Chr6:29185304 Mch8g2775 Mch-Chr8:30811818 1.01E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2772 K05953 - csv:101218907 475.322