Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2787 CTCACCAAAAAGGCAATGGAGCATTTGTTCTTCAAGTTCAATGAACTAACAAAGTCACTGACCCCTAAGAAATGGAGAAATTCTGAAAATGCATCAGTTGTGAGTGGGAGAGAAGCTGCAGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATCTGATTATCCATGGTTCAGGAAGTATAAATCTCGACGACTCGGAGAACTTCGTCTCAAGTTTTTCGAAGAGGGGCGAGAAAGGAACCAATCAGGACTGCTGCATTGTGTGGGAGGAATTTGGGTGTCAAAAGGATATGATATTTTGTGGGGTCTTTGATGGCCATGGACCATGGGGCCATTTTGTTGCAAAGAAGGTTAGAAAGTCAATGCCAACAGCTCTGCTTTGCAATTGGCAAGATGCACTTGTTCAAACTGCTCTTCAACCAAATTTAGAACTCAATTCAGGGAAATCACATCTACAGTTCAATATATGGAAGCATTCTTATATAGAAGCCTGTGCTACCATTGATCTAGAACTCGAGCGGCACCGTAAAATCGACACGTTCCATAGTGGAACAACGGCCCTTTCAATCGTTCGACAGGGTGATATGATTGTTATTGCAAACACAGGCGACTCCCGAGCCGTGATGGCTACAACTTCTGATGATGGAAACTCGGTACCATTACCAATTCAGCTCACTGTTGATTTCAAGCCAAATCTACCTCAGGAGGCTGAGAGGATAGCACAATGCAATGGGAGAGTTTTCTGCTTGCCAGATGAACCCGGGACTCCCCGTATCTGGCTGCCGAACAGGGCAGCTCCCGGGTTGTCGATGTCGAGATCCTTCGGCGATTTTTGTGTCAAGCATTTTGGACTCATCTCTATGCCCGATGTAACACAAAGAACTGTGACCAGCAAAGACCTGTTTGTTGTGCTTGCAACTGATGGGATATGGGACGTCGTCTTGAATCAAGAAGCAGTGCAGATCGTTCATTCAACGACGGATAGAGCCAAATCAGCTCGACGATTGGTTGAGTATGCTACCCGTGCGTGGAAGCGGAGGAGGCCGGGAATTGCAATGGATGACATGTCGGTTATCGTCCTCTTTCTCCATTTTTCACCTTTGCATCAACAAGCTTATGTTGTAGCTCCAATGGAAAAAGAAGCATGA 1146 45.72 LTKKAMEHLFFKFNELTKSLTPKKWRNSENASVVSGREAAEAMAKSAKKKDLIIHGSGSINLDDSENFVSSFSKRGEKGTNQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRKSMPTALLCNWQDALVQTALQPNLELNSGKSHLQFNIWKHSYIEACATIDLELERHRKIDTFHSGTTALSIVRQGDMIVIANTGDSRAVMATTSDDGNSVPLPIQLTVDFKPNLPQEAERIAQCNGRVFCLPDEPGTPRIWLPNRAAPGLSMSRSFGDFCVKHFGLISMPDVTQRTVTSKDLFVVLATDGIWDVVLNQEAVQIVHSTTDRAKSARRLVEYATRAWKRRRPGIAMDDMSVIVLFLHFSPLHQQAYVVAPMEKEA 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29320844 29323003 + MC06g2191 Mch6g2787 692234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2787 381 Pfam Protein phosphatase 2C 76 340 IPR001932 -
Mch6g2787 381 SMART PP2C_4 61 360 IPR001932 -
Mch6g2787 381 CDD PP2Cc 67 362 IPR001932 -
Mch6g2787 381 SUPERFAMILY PP2C-like 69 363 IPR036457 -
Mch6g2787 381 Gene3D - 61 364 IPR036457 -
Mch6g2787 381 ProSiteProfiles PPM-type phosphatase domain profile. 68 362 IPR001932 -
Mch6g2787 381 PANTHER PROTEIN PHOSPHATASE 50 361 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch6g2787 381 FunFam Probable protein phosphatase 2C 34 59 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2787 Mch-Chr6:29320844 Mch7g1205 Mch-Chr7:15686081 9.00E-131 dispersed
Mch6g2787 Mch-Chr6:29320844 Mch8g2798 Mch-Chr8:30983631 3.85E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2787 - - - 0.0