Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2789 ATGACTTCTTTTGTCAAGCCAGAGAATGCTTTAAAGCGTGCTGAAGAGCTCATCAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCCAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTTTGTGTGGACATGAGGAAAGGGAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAACAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCTACTGAGAAGGCAGAACAGGCTCGTAGTCAAGCTCAAGCATTAGAAGAAGCTCTTGATGTTGATGACTTGGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGGGAAAAGGGAAAGGATAGATCTGATCGCGAACTTGTTACTCCTTGGTTTAAATTTTTATGGGAGACATATCGAACAGTTCTCGAGATACTGAGGAATAACTCGAAGTTGGAGGCGCTTTATGCGATGACAGCCCATCGTGCATTCCAGTTCTGTAAGCTGTATAAAAGAACCACTGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTGGCCAATCTCAACAAGTATAGAGACCAAAGAGACCGGCCTGACCTATCTGCTCCAGAGAGCTTGCAATTGTACCTAGACACAAGATTCGAACAGCTGAAGGTTGCCACAGAGCTTGAACTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGCATGGTTAAGAAAACACCTAAACCATCCTTGATGGTGGTTTATTATGTCAAATTAACAGAGATCTTCTGGATATCGGATAGTAATCTTTATCATGCCTATGCATGGCTTAAACTCTTCACCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGACTTACAACTGATAGCATCATCTGTTGTTTTAGCAGCACTTGCAGTGCCCCCCTATGACTCCAAGCATGGTGCTTCACATTTAGAGCTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGCAAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTACTGAGCTGTGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAGTTCTTCCCTCTTGATCTTGCAATAAAATTGCAACCCTTGCTAAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTTCCTGAAGTGCAATTGTCCCAATATGTTCCAGCTCTTGAGAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCCAGGTCTATCAGACTATGAAAATAGAGAGTCTATCCCAGATGATTCCATATTTTGATTTTTCTGTCGTGGAGAAAATTTCAGTTGATGCGGTTAAACAAAATTTCATTGCTATGAAAGTTGATCATTCAAGGAATATCGTGTTATTTGGCAATTTGGGTATTGAATCAGATGGGCTCCGGGACCACTTGACTGTTCTTGCTGAATCCTTAAACAAAGCAAGAGCCATGATCTATCCTCCAGTAAGGAAAGCATCGAAAACTGTTGAAATATTGCCTGATTTGACAGATATTGTTGATAAAGAGCACAAGAAGCTTCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGGCAACTTTTGGAAATGGAACGCGAGGAGGAATCAAGAAGGTTGAAATTACTGAAGATAACTGAAGAGGCTGAACAAAAGCGGCTTGCTGCTGAATATGAACAAAGGAAAAGTCAACGGCTTCGTAGGGAAATGGAGGAGCGGGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGGAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGATTCTGAAAAGTTGACTAAACAAAGTTTAATGCAATTGGCCCTGACCGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTACAAAAGCTAGCCAAAACTATGGACTATCTAGAAAGAGCAAAAAGAGAAGAGGCAGCAACGTTAATTGATGCTGCATTCCAGCAACGTTTGCTTGAAGAGAGAATGATTCATGAACGGGATCAGCAGCTGGAGGTTGAGTTAAGCCAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCTCGAATGTTGGAGAGCAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAACAGACGTAGATCTGAGAGAGAAGAACAGATCAGGCAAATAATTCAGGCCCGGAAAGCGGAAAGGGAGGCTAAGAGGAAGAAAATCTTTTATGTTAGGCGCGAAGAGGAGAGGCTTAGAATATTGCGTGAAGAGGAGGAAGCACGCAAGCGAGAAGAGGCTGAGAGGAGAAAGAGGGAAGAAGCTGAACGCAAGGCGAAATTGGATGAGATTGCTGAGAAGCAGAGGCAGAGGGAGCGAGAATTGGAAGAAAAAGAAAGACTGCGGAAAGAATCGCTCTTTGGTGGTGGCAGATCAACCGATGCGCCTGCTAGACCTGATGCTTCTACTGGTTCTCGGCCTCTGGAGTCTGGGACTGCTGCTCCTGCTGCAGCTGCTCCTGCTGGCCCGACTCCAGGAAAATATGTGCCAAGGTTCCGACGGCCTGAAGGTGCCAGCCCTAATGCACCACCTGAATCTGATCGATGGGGAAGCAGCAGGCCGGACAGTCGACCATCCCAACCAGACAGCTGGCGCAGTGATGATCGCAGACCAGCATTTGGAAGTTCAAGGTCGTCGTGGTCCTCATCCCGAGTTCCCGCTCGTGGTAGCACGGAACGCTGA 2904 44.01 MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFTLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLAIKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSQVYQTMKIESLSQMIPYFDFSVVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPVRKASKTVEILPDLTDIVDKEHKKLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLTKQSLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIDAAFQQRLLEERMIHERDQQLEVELSQQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFNRRRSEREEQIRQIIQARKAEREAKRKKIFYVRREEERLRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGGGRSTDAPARPDASTGSRPLESGTAAPAAAAPAGPTPGKYVPRFRRPEGASPNAPPESDRWGSSRPDSRPSQPDSWRSDDRRPAFGSSRSSWSSSRVPARGSTER 967
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 29331092 29339824 + MC06g2193 Mch6g2789 692236
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2789 967 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Mch6g2789 967 Coils Coil 774 794 - -
Mch6g2789 967 Coils Coil 93 120 - -
Mch6g2789 967 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Mch6g2789 967 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Mch6g2789 967 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Mch6g2789 967 Gene3D UVR domain 217 268 - -
Mch6g2789 967 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 958 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Mch6g2789 967 Pfam PCI domain 438 508 IPR000717 -
Mch6g2789 967 MobiDBLite consensus disorder prediction 947 967 - -
Mch6g2789 967 Coils Coil 610 649 - -
Mch6g2789 967 Coils Coil 799 858 - -
Mch6g2789 967 Pfam eIF3a, PCI domain, TPR-like region 8 407 IPR054711 -
Mch6g2789 967 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Mch6g2789 967 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 942 IPR027512 GO:0005852(InterPro)
Mch6g2789 967 Gene3D - 363 494 - -
Mch6g2789 967 Gene3D - 269 343 - -
Mch6g2789 967 MobiDBLite consensus disorder prediction 814 861 - -
Mch6g2789 967 Coils Coil 561 600 - -
Mch6g2789 967 Coils Coil 669 699 - -
Mch6g2789 967 MobiDBLite consensus disorder prediction 814 967 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2789 K03254 - csv:101209344 1501.11