Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2791 ATGAGTCAGACAGAAGTATCAAGGATAAAGCCCCCTCTTGTTCCACTTGCAACTTTGATCGGTCGTGAGCTGAGGAACGAGAAGGTAGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATAAAACTCGATTGCCAGCGTATACCTGGAAACCCATCAACTTCATTTTCTGTCTTTGCGATTTTTGATGGGCATAATGGCATATCAGCTGCTATCTTTGCAAAGGAACACCTACTGGGTAATGTTCTAAGTGCGATTCCTCATGGGGCCAGTCGAGAAGAATGGCTCCAAGCCCTTCCTCGGGCACTAGTTGCTGGTTTCGTTAAAACCGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACCACCGTTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGACTGGAGGAAAATGAGGAAGAGAGGGAACGGGTGACTGCAAGTGGTGGTGAAGTAGGGAGGCTCAACGTTTTTGGCGGAAATGAGGTCGGTCCTCTCCGCTGCTGGCCCGGTGGCTTATGTCTTTCTAGGTCCATTGGGGATACAGATGTAGGAGAATATATTGTCCCGATACCGCATGTTAAGCAAGTGAAGCTTTCAAATGCTGGCGGGAGACTAATAATTGCTTCTGATGGTATATGGGACGCTTTATCTTCTGATATGGCCGCAAAGTCTTGTCGAGGTTTACCTGCCGAGCTTGCTGCTAAGCTGGTTGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTAGATATTATCCCATCCGAGCAACCTATATTGTTACCACCAACTCCAAGGAAGAAACAAAATGTGCTCACCTCACTCTTTGGGAAGAAACGTCAAAACTCTTTGGGCAAATCTGCAAATAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCCATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAATGAAAGTTTGTCTATGAACTCGGGGCCCTTCTTTTCACCATCGTCGAAGCCTTGGGAAGGTCCGTTCCTCTGCACAACTTGCCGAAGAAAGAAAGACGCCATGGAAGGAAAAAGGCCAACAAAACCTACAATAACCGTTTAG 1287 46.39 MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRIPGNPSTSFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPHGASREEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPPTPRKKQNVLTSLFGKKRQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNESLSMNSGPFFSPSSKPWEGPFLCTTCRRKKDAMEGKRPTKPTITV 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29345587 29349421 - MC06g2195 Mch6g2791 692238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2791 428 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Mch6g2791 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Mch6g2791 428 Gene3D - 38 302 IPR036457 -
Mch6g2791 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch6g2791 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Mch6g2791 428 SMART PP2C_4 23 295 IPR001932 -
Mch6g2791 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Mch6g2791 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Mch6g2791 428 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0274 Mch-Chr11:1726686 Mch6g2791 Mch-Chr6:29345587 2.35E-171 dispersed
Mch2g1810 Mch-Chr2:17437420 Mch6g2791 Mch-Chr6:29345587 3.75E-27 dispersed
Mch6g2791 Mch-Chr6:29345587 Mch9g1938 Mch-Chr9:20863772 5.83E-209 dispersed
Mch6g2791 Mch-Chr6:29345587 Mch5g0651 Mch-Chr5:4335453 1.19E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2791 - - - 0.0