Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2847 ATGATGGAGAAGACGATGAAGTCGATAACCCAGATTTTGTTTTGTGTATTTTTCTACTGTTGTATTGGTTATCTTACCCAGTGTTCCGCTGCTGGGTTTAGTGAAGAAGCATTGGCTTTGGTTTCGATTAAATCTGGACTTGTTGATCCGTTAAAGTGGCTCAGAGATTGGAAGTTGGGCGATGGAAATGGTAAGTTTGCAGGGCAGTGTAATTGGACGGGAGTTTTTTGCAACTCAGAAGGAGCTGTTGAGAAACTGAGCCTTTCTCGAATGAATCTCAGTGGCATTTTGTCGAACGACTTGCAGAAACTAAGAAGCCTCTCTTCTCTCGACTTGAGCTGCAATGGGTTTTCTTCTTCCTTGCCAAAATCTATGGGCAATCTCACTTCCCTGAAGAGCTTTGATGTGAGTCAAAATTTTTTCGTCGGAAGCATTCCGGGGGGCTTCGGGACGATGGCCGGCTTGACAAATTTCAATGCGTCAAGCAACAATTTCTCTGGTTTTATCCCTGAAGATCTTGGAAATGCTACTCTGCTGGAGATTCTGGATCTCCGAGGGAGTTTTCTTGAAGGGTCAATTCCCATATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTGGGGCTTTCTGGGAACAACCTGACCGGGCGAATCCCGCCGGAGATCGGTCAGCTGTCGTCGTTAGAGACTGTTATTATGGGATACAATGAGTTTGAAGGAGGGATTCCATCAGAGTTCGGAAATCTCACCAATCTCAAATATCTTGATTTGGCTGTGGGAAATCTTGGTGGTGGGATTCCTGCTGAGCTTGGGAGGCTCAAACAACTTGAGACATTGTTCTTGTACAAGAACGGTTTCGAAGAGCGAATTCCGCAGTGGATTGGTAATGCTACTTCATTAGTGTTTCTTGATCTTTCAGACAACAAGTTGACAGGTGAAATTCCAGCTGAGATAGCTGAACTGAAGAATTTGCAGCTACTGAATCTAATGTGTAATATGCTGTCTGGTGAAGTACCTCCAGGAATAGGAGGGTTGACAAAATTGCAGGTTCTAGAGCTATGGAACAACTCTTTTTCGGGCCAACTTCCTGGCGATCTCGGCAAGAACTCGGAGTTGGTATGGTTGGATGTCTCATCCAATTCATTCTCTGGTCCAATTCCGGCTTCTTTGTGCAATAGGGGCAATCTAACCAAGCTCATCCTTTTCAACAATGCTTTTTCGGGTCCGATTCCGGTTGGATTATCGTCATGTTACTCACTAGTTCGTGTTCGAATGCAGAACAATCTGCTATCTGGGACGATTCCAGTTGGGTTTGGAAAGCTTTGGAAGCTTCAAAGGCTAGAATTGGCAAACAACAGTCTCATTGGGAGTATCCCAAGTGATATTTCCTCTTCTACATCCCTTTCTTTTATTGATCTTTCTGAAAATGAACTTCATTCTTCTATTCCTTCCTCAATTCTGTCCATTCCAAATCTTCAAACTTTCATAGTCTCTGACAATAACTTGGAAGGTGAAATTCCAGACCAGTTTCAGGATTGTCCTGCACTTTCTGTGCTTGATCTCTCCTCGAACCATTTTACAGGAAGCATTCCAGAAAACATTGCTTCATGTGAGAGATTGGTAAATCTGAATCTCAGAAACAACCAGTTAACTGGAGAAATCCCAAAACAGATTGCAAATATGCCTTCATTGTCCGTCCTTGATCTATCCAACAACTCTCTTACTGGTAGAATACCCGATAATTTCGGTATCTCTCCTGCACTGGAATCGCTTAATGTCTCTTACAATAAGCTTGAAGGTCCAGTTCCATTAAATGGTGTGTTAAGAACAATCAACCCAAGTGATCTTCAGGGCAATGCTGGTCTATGTGGAGCTGTCCTGCCTCCATGCTCACCAAATTCAGCATTTGCATCAGGGCACGGGAGCTCGCACATGAAGCATGTTATCACCAGTTGGGTCATTGGAATATCTGCAGTTTTAGCGATCGTTATTACTCTTTTCGGTGTTCGATCGTTGTATAAGAGGTGGTACTCGAATGGAAGTTGCTTTGAGGAGAGATATGAAATGGGTAGTGGATATTGGCCATGGAGATTGATGGCATTCCAACGGCTTGGATTCACAAGCAGTGACATTTTGGCTTGCATCAAGGAATCAAATGTGATTGGAATGGGAGCAACTGGGATTGTGTACAAAGCTGAAATGCCACAACTAAAGACAGTTGTGGCTGTCAAAAAGCTGTGGAGATCAGAATCAGATCTTGAACTTGGAAGCAGTGAAGGTCTAGTAGGAGAAGTGAATTTACTGGGAAAGTTAAGGCACAGGAACATAGTTCGATTAATTGGGTTTATGCATAATGATGTCGATGTAATGATCATCTATGAGTTTATGCAAAATGGGAGCCTTGGAGAAGCCTTGCATGGTAAACAAGCAGGGAGGCTGCTTGTGGACTGGGTTTCAAGATACAACATAGCACTCGGAGTTGCGCAAGGGCTAGCTTATCTCCATCACGATTGCAACCCACCCATCATTCATCGGGACGTTAAGCCAAATAATATACTTCTTGATTCGAGTCTTGACGCACGGTTAGCTGATTTCGGGTTGGCACGGATGATGGCTCGAAAGAACGAGACAGTTTCGATGGTAGCTGGATCCTATGGCTACATTGCCCCCGAATATGGATACACTTTAAAGGTAGATGAAAAGATCGACATTTACAGCTACGGTGTCGTACTTTTAGAGTTACTGACAGGAAAGAAGCCATTAGATCCCGAGTTTGGGGAATCTGTGGACATAGTTGAATGGATTAGAAGGAAGGTTAGAGACAACAGATCCTTAGAAGAAGCATTAGATCCAAATTTGGGAAATTTCAAGCATGTTCAGGAAGAAATGCTGTTCGTTCTTAGAATAGCACTTCTCTGCACTGCAAAGCATCCAAAAGACAGGCCTTCCATGAGAGATATTATAACAATGCTGGGAGAAGCAAAACCGAGGAGAAAAAGCAATAGTGGTGGCAATGAAGGATTTGGAACTAACAAAGAGAAGCCAGTTTTCAGCACTTCACCTGTAAATGGCCTTCTGTAG 3078 43.31 MMEKTMKSITQILFCVFFYCCIGYLTQCSAAGFSEEALALVSIKSGLVDPLKWLRDWKLGDGNGKFAGQCNWTGVFCNSEGAVEKLSLSRMNLSGILSNDLQKLRSLSSLDLSCNGFSSSLPKSMGNLTSLKSFDVSQNFFVGSIPGGFGTMAGLTNFNASSNNFSGFIPEDLGNATLLEILDLRGSFLEGSIPISFKNLQKLKFLGLSGNNLTGRIPPEIGQLSSLETVIMGYNEFEGGIPSEFGNLTNLKYLDLAVGNLGGGIPAELGRLKQLETLFLYKNGFEERIPQWIGNATSLVFLDLSDNKLTGEIPAEIAELKNLQLLNLMCNMLSGEVPPGIGGLTKLQVLELWNNSFSGQLPGDLGKNSELVWLDVSSNSFSGPIPASLCNRGNLTKLILFNNAFSGPIPVGLSSCYSLVRVRMQNNLLSGTIPVGFGKLWKLQRLELANNSLIGSIPSDISSSTSLSFIDLSENELHSSIPSSILSIPNLQTFIVSDNNLEGEIPDQFQDCPALSVLDLSSNHFTGSIPENIASCERLVNLNLRNNQLTGEIPKQIANMPSLSVLDLSNNSLTGRIPDNFGISPALESLNVSYNKLEGPVPLNGVLRTINPSDLQGNAGLCGAVLPPCSPNSAFASGHGSSHMKHVITSWVIGISAVLAIVITLFGVRSLYKRWYSNGSCFEERYEMGSGYWPWRLMAFQRLGFTSSDILACIKESNVIGMGATGIVYKAEMPQLKTVVAVKKLWRSESDLELGSSEGLVGEVNLLGKLRHRNIVRLIGFMHNDVDVMIIYEFMQNGSLGEALHGKQAGRLLVDWVSRYNIALGVAQGLAYLHHDCNPPIIHRDVKPNNILLDSSLDARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDPEFGESVDIVEWIRRKVRDNRSLEEALDPNLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSGGNEGFGTNKEKPVFSTSPVNGLL 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29699103 29707865 - MC06g2239 Mch6g2847 692294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2847 1025 ProSiteProfiles Protein kinase domain profile. 714 997 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2847 1025 Pfam Protein kinase domain 716 987 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2847 1025 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Mch6g2847 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2847 1025 Gene3D Transferase(Phosphotransferase) domain 1 799 1008 - -
Mch6g2847 1025 Gene3D Ribonuclease Inhibitor 291 370 IPR032675 -
Mch6g2847 1025 SMART LRR_typ_2 512 536 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 104 128 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 344 368 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 200 224 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 488 511 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 560 584 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 272 296 IPR003591 -
Mch6g2847 1025 SMART LRR_typ_2 440 464 IPR003591 -
Mch6g2847 1025 MobiDBLite consensus disorder prediction 990 1025 - -
Mch6g2847 1025 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 993 IPR050647 -
Mch6g2847 1025 Gene3D Phosphorylase Kinase; domain 1 714 798 - -
Mch6g2847 1025 FunFam MDIS1-interacting receptor like kinase 1 799 1006 - -
Mch6g2847 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 188 288 - -
Mch6g2847 1025 SUPERFAMILY RNI-like 265 602 - -
Mch6g2847 1025 Pfam Leucine rich repeat 489 549 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 SUPERFAMILY Protein kinase-like (PK-like) 712 990 IPR011009 -
Mch6g2847 1025 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Mch6g2847 1025 SMART serkin_6 714 990 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2847 1025 Gene3D Ribonuclease Inhibitor 371 633 IPR032675 -
Mch6g2847 1025 FunFam MDIS1-interacting receptor like kinase 1 714 798 - -
Mch6g2847 1025 Gene3D Ribonuclease Inhibitor 187 290 IPR032675 -
Mch6g2847 1025 ProSitePatterns Protein kinases ATP-binding region signature. 720 744 IPR017441 GO:0005524(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 346 367 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 298 320 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 155 175 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 322 344 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 442 463 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 106 128 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 202 224 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 562 582 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 Pfam Leucine Rich Repeat 371 391 IPR001611 GO:0005515(InterPro)
Mch6g2847 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 372 633 - -
Mch6g2847 1025 SUPERFAMILY L domain-like 81 361 - -
Mch6g2847 1025 PRINTS Leucine-rich repeat signature 299 312 - -
Mch6g2847 1025 PRINTS Leucine-rich repeat signature 560 573 - -
Mch6g2847 1025 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 33 187 - -
Mch6g2847 1025 FunFam Leucine-rich repeat receptor protein kinase EMS1 289 371 - -
Mch6g2847 1025 MobiDBLite consensus disorder prediction 1002 1025 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0344 Mch-Chr1:7250580 Mch6g2847 Mch-Chr6:29699103 1.30E-53 dispersed
Mch4g1936 Mch-Chr4:21909440 Mch6g2847 Mch-Chr6:29699103 4.68E-72 dispersed
Mch6g2847 Mch-Chr6:29699103 Mch7g0882 Mch-Chr7:13388969 1.23E-89 dispersed
Mch10g0270 Mch-Chr10:1746879 Mch6g2847 Mch-Chr6:29699103 4.23E-110 transposed
Mch11g0763 Mch-Chr11:5143109 Mch6g2847 Mch-Chr6:29699103 4.36E-26 transposed
Mch6g0098 Mch-Chr6:601331 Mch6g2847 Mch-Chr6:29699103 1.38E-58 transposed
Mch8g3013 Mch-Chr8:32744549 Mch6g2847 Mch-Chr6:29699103 2.20E-42 transposed
Mch6g2847 Mch-Chr6:29699103 Mch7g1064 Mch-Chr7:14680084 1.19E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77533 PF00069 Pkinase 8.70E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2847 - - - 0.0