Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2849 ATGGATTCCAACACCCAGATGGTTTTTCTTTCCACCCTTTTCCTCTGCTTTCTTTCACTCCGAGCAAACGCTTCCACTCTTCAAACTTACCTAATTCAACTCCACCCACAGGGCATAACCACCTCTCTGTTCGATTCTAAGCTTCAATGGCACCTTTCTTTTCTTGAACAAACTCTATCTGCTGAAGAAGACTCTTCTTCTCGCTTGCTTTACTCATATTCTAACGCCATGGAAGGGTTTGCAGCTCAGTTATCTGAAACAGAGCTGGAGTATTTGCAGAAATTGCCTGATGTAGTGGCAGTAAGAGCTGACAAAAAGTATGAAATTCAGACAACTTACTCTCCTAAGTTCTTGGGACTCGAGGAAGGCAGACAAGGTGTTTGGTATAAGTCTGCAATGGGCCAGAGGGCTATAATTGGGGTTCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGTTTTAGTGATTCTAAAATGCCCCCAATTCCAATAAAATGGAGAGGGGCTTGCCAAGAAGGGCAGGAGTTTAATTCCTCAATTTGTAATAGGAAACTCATTGGTGCTAAGTTCTTTATCAAAGGACATCATGTGGCTTCATCGCCACCTTCTGATATAGTCCAGGAATACGTCTCCCCGAGGGACTCTCATGGCCATGGGACTCACACGTCTTCTACAGCTGCGGGAGCTTCCGTTGCAGGAGCAAGTGTGTTCGGTAATGGAGCTGGCGTCGCACAAGGGATGGCCCCGGGAGCCCGCATTGCGGTGTACAAGGTTTGCTGGTTCAGTGGTTGCTATAGCTCTGATATTGTAGCAGCAATGGATGCTGCAATAAGGGATGGTGTTGACATTCTCTCCCTTTCGCTTGGCGGTTTTCCACTTCCATTTTTCGATGACAGCATTGCCATTGGCAGTTTCCGAGCAATGCAGCATGGCATCTCGGTCATTTGTGCAGCAGGAAATAATGGCCCAATTCAAAGCTCTGTTGCTAATGCTGCTCCTTGGATCACCACCATTGGAGCAAGCACACTCGACCGAAGATTCCCAGCTGTAGTTCGACTGAGCACTGGAGAAGCCATTTACGGCGAATCAATGTACCCCGGAAACAAGCTCATGGAAGCTACCAAAGAGCTTGAAGTGGTTTATCTGACCGGAGGGCAAATGGGAGGTGAACTCTGCTTAAAAGGGTCTCTTCCACGAGAAAAAGTAGAAGGAAAAATGGTGGTCTGTGACCGTGGCGTCAATGGCAGATCTGAAAAAGGGCAAATTGTGAAGGAATCCGGAGGCGCTGAAATGATCCTAGCAAACGCCGAGGTAAATCAGGAGGAAAACTTGGTAGATGTCCATGTCTTGCCAGCCACATTGATCGGATTTGCCGAAGCAAATCGCTTGAAAGCTTACATTAACACCACAAATAACCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATCGGGAGATCAAGAGCTCCATCTGTAGCTCGGTTTTCATCCAGAGGACCAAGCCTCTCCAACCCTTCAACTCTCAAGCCTGATGTAATTGCTCCTGGGGTCAACATCATAGCAGCTTGGCCTCAAAATCTTGGCCCCACTGGCCTTCCAGAAGATACTAGAAGGTCAAACTTCACAGTCATGTCAGGAACTTCCATGGCTTGTCCCCATGTCAGTGGAATTGCAGCTCTAATCCATTCAGTTCACCCCAGATGGACACCTGCAGCTATTAAGTCGGCCATTATGACAACTGCTGATGTTTCCGATCATTTTGGAAAGCCAATTCTTGATGGCAATAAACCAGCTGGAGTTTTTGCAATGGGAGCTGGCCATGTAAATCCAACAAGAGCCGTCGATCCTGGTTTGGTATATGATATCAAGCCATATGAATATGTCATCCATCTCTGTGCTCTTGGATACACTCATTCAGAAATCTTCATTATCACTCACATGAATGTGAGCTGCCATGAAGTTCTCCAGATGAACAGAGGCTTCAGCTTGAACTACCCTTCCATGTCTGTTGTTTTCAAGCACGGGACAACGAGTAAAACAGTTTCAAGACGATTGACGAACGTGGGGAGCCCAAATTCCATCTACTCGGTGGAAGTATCGGCGCCCGAAGGAGTAAGAGTAAGAGTTAAGCCTCGGCGCTTGGTGTTCAAACATGTGAATCAAAGTTTGAATTATAGAGTATGGTTTATTTCTGAGAAGGGAAGAGAAGGAAGAAAAGTGAGCTTCGGAGAAGGGTATTTGACATGGGTTCATTCTGAGAACGGCAAATACCGAGTTAGAAGCCCAATTGCAGTGACTTGGAAGAACTGA 2307 46.47 MDSNTQMVFLSTLFLCFLSLRANASTLQTYLIQLHPQGITTSLFDSKLQWHLSFLEQTLSAEEDSSSRLLYSYSNAMEGFAAQLSETELEYLQKLPDVVAVRADKKYEIQTTYSPKFLGLEEGRQGVWYKSAMGQRAIIGVLDTGVWPESPSFSDSKMPPIPIKWRGACQEGQEFNSSICNRKLIGAKFFIKGHHVASSPPSDIVQEYVSPRDSHGHGTHTSSTAAGASVAGASVFGNGAGVAQGMAPGARIAVYKVCWFSGCYSSDIVAAMDAAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVICAAGNNGPIQSSVANAAPWITTIGASTLDRRFPAVVRLSTGEAIYGESMYPGNKLMEATKELEVVYLTGGQMGGELCLKGSLPREKVEGKMVVCDRGVNGRSEKGQIVKESGGAEMILANAEVNQEENLVDVHVLPATLIGFAEANRLKAYINTTNNPKARIQFGGTVIGRSRAPSVARFSSRGPSLSNPSTLKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRSNFTVMSGTSMACPHVSGIAALIHSVHPRWTPAAIKSAIMTTADVSDHFGKPILDGNKPAGVFAMGAGHVNPTRAVDPGLVYDIKPYEYVIHLCALGYTHSEIFIITHMNVSCHEVLQMNRGFSLNYPSMSVVFKHGTTSKTVSRRLTNVGSPNSIYSVEVSAPEGVRVRVKPRRLVFKHVNQSLNYRVWFISEKGREGRKVSFGEGYLTWVHSENGKYRVRSPIAVTWKN 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29711547 29714699 - MC06g2240 Mch6g2849 692296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2849 768 Pfam PA domain 378 462 IPR003137 -
Mch6g2849 768 FunFam subtilisin-like protease SBT1.5 343 483 - -
Mch6g2849 768 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Mch6g2849 768 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Mch6g2849 768 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Mch6g2849 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Mch6g2849 768 ProSiteProfiles Serine proteases, subtilase domain profile. 112 613 - -
Mch6g2849 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Mch6g2849 768 Gene3D - 630 766 - -
Mch6g2849 768 SUPERFAMILY Subtilisin-like 110 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch6g2849 768 Pfam Fibronectin type-III domain 662 764 IPR041469 -
Mch6g2849 768 FunFam Subtilisin-like protease SBT1.9 19 110 - -
Mch6g2849 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 762 IPR045051 -
Mch6g2849 768 Gene3D Peptidase S8/S53 domain 138 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch6g2849 768 CDD PA_subtilisin_like 349 476 - -
Mch6g2849 768 Pfam Peptidase inhibitor I9 29 109 IPR010259 -
Mch6g2849 768 FunFam Subtilisin-like protease SBT1.5 136 359 - -
Mch6g2849 768 Gene3D - 343 483 - -
Mch6g2849 768 Pfam Subtilase family 135 581 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch6g2849 768 SUPERFAMILY Protease propeptides/inhibitors 52 109 - -
Mch6g2849 768 CDD Peptidases_S8_3 107 581 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2565 Mch-Chr6:27550290 Mch6g2849 Mch-Chr6:29711547 1.26E-201 dispersed
Mch6g2849 Mch-Chr6:29711547 Mch9g1269 Mch-Chr9:14623793 2.12E-214 dispersed
Mch6g2849 Mch-Chr6:29711547 Mch6g0980 Mch-Chr6:6922850 2.25E-215 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2849 - - - 0.0