Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0042 GGAATAGAGAAACTTAGATCAAAGAGTAATGGAGGTTCCAAAAGGGAACAGCAGAGTCCCAAGGATACTCCTCTTGTCAATATTTCTGCTCAAACATTCACTTTCCGTGAGCTTGCGATTGCGACAAAGAATTTTAAACCCGAGTGCTTTATTGGGGAAGGAGGATTTGGACGTGTATACAAAGGGCGGCTTGAAAGCACAGGCCAGATTGTGGCCGTTAAACAGTTGGATAGGAATGGTCTTCAAGGTAACAGAGAATTTCTAGTGGAGGTTCTCATGCTTAGCCTTCTACATCATTCAAATTTGGTGAATCTGATTGGTTACTGTGCTGATGGGGATCAACGTCTACTTGTGTATGAGTTCATGCCTTTGGGATCGTTGGAAGATCATCTTCATGAAATTCCACTTGATAAGGAACCCCTAGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGAGGTTTAGAGTACTTGCATGACAAGGCAAATCCTCCAGTTATTTACAGAGACTTCAAATCCTCCAATATATTACTTGATGAAGGATATCATCCAAAACTTTCTGATTTTGGCCTTGCAAAGCTTGGCCCTGTTGGAGATAAATCTCATGTTTCCACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACCGGACAATTAACAGTCAAGTCTGATGTTTATAGCTTCGGTGTCGTTTTCTTAGAGTTGATTACTGGACGGAGAGCCATTGATAGCACCCGACCCCAAGGCGAACAGAACCTTGTTACTTGGGCACGCCCATTTTTCAACGACCGCAGAAGATTCTCGAAATTGGCTGATCCCCAGTTGCAGGGGAGGTATCCGATGCGAGGTCTCTACCAAGCTCTAGCTGTGGCATCCATGTGTACGCAAGAACAGGCTGCAGCCCGTCCGCTGATCGGAGATGTGGTCACTGCCCTCTCTTATTTGGCAAACCAATCCTATGATCCAAGTTCTCCTTCAGGTCCTTCTGCTCAGCGAGGTTCTGGTGATCGGGATGAAAGACGGAACAGAGATGAGAAAGGTGGAGGGGAAGAAGGGGGAGCATCCGGGCGAAGGTGGGCACTGGATGGTCCTGATAAGGACGATTCTCCGAGGGAGACCGTTAGGATTTTGAATAGGGATTTAGACAGAGAACGTGCAGTTGCTGAGGCCAAGATGTGGGGAGAGAATTGGCGAGAAAAAAGACGACAGAGTGCACAAGGCAGTTTTGATGGCTCAAACGGGTAA 1266 46.68 GIEKLRSKSNGGSKREQQSPKDTPLVNISAQTFTFRELAIATKNFKPECFIGEGGFGRVYKGRLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHEIPLDKEPLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPQGEQNLVTWARPFFNDRRRFSKLADPQLQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQSYDPSSPSGPSAQRGSGDRDERRNRDEKGGGEEGGASGRRWALDGPDKDDSPRETVRILNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGSNG 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 375400 380298 - MC07g0034 Mch7g0042 692380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0042 421 CDD STKc_IRAK 51 319 - -
Mch7g0042 421 MobiDBLite consensus disorder prediction 367 412 - -
Mch7g0042 421 MobiDBLite consensus disorder prediction 325 421 - -
Mch7g0042 421 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524(InterPro)
Mch7g0042 421 Pfam Protein kinase domain 50 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0042 421 MobiDBLite consensus disorder prediction 340 359 - -
Mch7g0042 421 Gene3D Transferase(Phosphotransferase) domain 1 122 332 - -
Mch7g0042 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch7g0042 421 MobiDBLite consensus disorder prediction 1 23 - -
Mch7g0042 421 PANTHER OS07G0668900 PROTEIN 15 341 - -
Mch7g0042 421 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Mch7g0042 421 ProSiteProfiles Protein kinase domain profile. 45 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0042 421 FunFam Serine/threonine-protein kinase PBS1 18 121 - -
Mch7g0042 421 FunFam Serine/threonine-protein kinase PBS1 122 337 - -
Mch7g0042 421 Gene3D Phosphorylase Kinase; domain 1 6 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0682 Mch-Chr5:4584271 Mch7g0042 Mch-Chr7:375400 3.32E-222 dispersed
Mch5g1795 Mch-Chr5:18360202 Mch7g0042 Mch-Chr7:375400 2.55E-178 dispersed
Mch7g0042 Mch-Chr7:375400 Mch9g0079 Mch-Chr9:654417 1.98E-165 dispersed
Mch9g2244 Mch-Chr9:22849797 Mch7g0042 Mch-Chr7:375400 5.47E-83 dispersed
Mch7g0042 Mch-Chr7:375400 Mch9g1622 Mch-Chr9:18385833 6.24E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77536 PF00069 Pkinase 3.50E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0042 K13430 - csv:101219880 759.599