Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0067 ATGTATTTGAGACTCGGGGGGATTTGTAATATGGGTGAAGGATCTATGGATGACATAAAAGGAACTAGAGTTACTTTGATCGAGTCATCGTCTTCGAGATTAATGAAGAGGTCGCGTGCTCCCGGGGGTGGAGCCCAAGTCCCTTTGTGTTTGGTTGATGGATGCAGTTCAGACCTTAGCAAATGCAGGGACTACCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAAGAACAACGGTTCTGCCAACAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTCGATGGACACAACCGACGTCGAAGAAAGCCTCAGCCAGCTTCTATGGCACTAAATGCAGGAAGATTTCTCTATGGTAACCAAGGTCCGAGATTCTTGCCATTTGGTAATCAACTACTCCCTGCCAGTGATAATGTCAGCTCTTCTTGGATTGGAGCGATCAAACCCGAGAACAACGCCCCTCTTTGCGGCAGCAATACGCAGTTCGGCTTTGCTGATAGAAGAAAAGATATGTTGCCTGGGTCTCTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTATATCCCTATAGGACTGCTTCCCAAATCATCCAATATCCAGCCATTTCTCGATGTTGGATCGAGCAATGGCGAGAATGTTCAGAAAGTGCTCGGAAACGGATCGAATCGATTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCTGGGGAGATTAATCTAAGCTCCATGGTCCAACCCAACCTCATCCCCCCAGCCCATTTCATCCACAGCGACAGTCTCGGCTTGGAGAGTGACCCCGGGAATTCTGGTTTGGTTTCGGACGGTAGCAGCGATGCAAACATCCGGTGCTACTCGACGTTCCAGATCGGACCTGATGGATCTTCAGTAGATTTATTCAGGTTTTGA 987 47.42 MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGENVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVSDGSSDANIRCYSTFQIGPDGSSVDLFRF 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 649973 653075 + MC07g0054 Mch7g0067 692405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0067 328 ProSiteProfiles Zinc finger SBP-type profile. 47 124 IPR004333 GO:0003677(InterPro)
Mch7g0067 328 FunFam Squamosa promoter-binding-like protein 14 42 111 - -
Mch7g0067 328 Gene3D - 41 111 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
Mch7g0067 328 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 295 IPR044817 GO:0003677(InterPro)
Mch7g0067 328 Pfam SBP domain 50 123 IPR004333 GO:0003677(InterPro)
Mch7g0067 328 SUPERFAMILY SBT domain 48 129 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1679 Mch-Chr3:18429392 Mch7g0067 Mch-Chr7:649973 3.84E-34 dispersed
Mch6g0049 Mch-Chr6:291451 Mch7g0067 Mch-Chr7:649973 3.22E-59 dispersed
Mch6g0308 Mch-Chr6:2036245 Mch7g0067 Mch-Chr7:649973 2.11E-39 dispersed
Mch7g0067 Mch-Chr7:649973 Mch8g2099 Mch-Chr8:24026372 1.35E-30 dispersed
Mch3g1334 Mch-Chr3:16093399 Mch7g0067 Mch-Chr7:649973 2.00E-56 wgd
Mch7g0067 Mch-Chr7:649973 Mch8g1392 Mch-Chr8:10364197 8.43E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43682 PF03110 SBP 7.40E-29 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0067 - - - 0.0