Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0079 TTGTGGCTGATTTCCATGAACTGGTTCATTAATGGTGGAGCTATGGAAACTAAGGCTGGTTTGGTTGGTGGGGGAGGGAAGATATGGCTGCAACTGTGGGGGAAGGTAATTGGGAACTGCTGCAAGATCCATCACCAGTACTACCAGTATATTGGATCCAAGAAGTTCAGAAAAACATGGTGGAGAAGGCTTTTGTTGGGGTGGGTTATTGGGTGGACTTTGGCTTCTTTATGGATCTTCCACTACATGAGCTCACAAGCCACTGAGAAGAGGAAAGAGACCTTGGGAAGCATGTGTGATGAGAGGGCCAGAATGCTTCAAGACCAGTTTAATGTCAGCATGAATCATATTCAAGCAATGTCCATTCTCATCTCCACCTTCCATCATGGCAAAAACCCATCTGCTATAGATCAGAGGACCTTTGCGAGGTACACAGAAAGAACTGCTTTTGAGAGGCCTCTTACGAGTGGTGTGGCATATGCGGTGAGGGTGCTCCATTCGGAAAGAGAACATTTCGAGAAGCAACAGGGCTGGACGATCAAAAGGATGGACAAAATCGAACAAAGTCCGGTTCACGAAGATGACTATGCTCCAGAAGCCCTGGAGCCATCGCCCACCCAAGAAGAATATGCTCCTGTAATCTTCGCGCAGGATACTATTTCTCATGTCGTTTCTCTCGATATGCTGTCGGGAAAGGAAGACCGTAAAAATGTATTACGTGCTAGAGCATCGGGAAAGGGAGTCTTAACTGCCCCATTCAGGCTAATCAAAACAAATCGTCTCGGAGTCATACTTACATTTGCTGTCTACAAGAGAGATCTTCCCTCAAATGCTACTCCAAATGAGAGGATTCAAGCTACAGATGGGTATCTTGGTGGAGTTTTTGATATCGAGTCGCTGGTGGAGAAGTTACTTCAACAGCTTGCAAGCAACCAAACCATCCTAGTCAATGTTTACGATACCACAAACCAATCGCACCCGATCAGCATGTATGGTAAAGACACATCAGAAGATGGGTTGCAGCGCATTAGCCCCCTTAACTTTGGGGATCCAGATAGGAAGCATGAGATGCGATGCAGATTCAAGCAAAAACAACCTTGGCCATGGTTAGCAATAACAACTTCAATTGGTGTACTCATCATTGCATTGCTTTTGGGGTATATATTCCATGCAGCCTTGAACCGAATCGCCAAAGTGGAGGATGATTATCACGATATGATGGAACTCAAGAAACGAGCAGAAGATGCCGATGTTGCCAAATCCCAGTTCCTTGCAACTGTTTCCCATGAGATCAGAACCCCAATGAATGGTGTTCTAGGAATGTTGCATTTGCTTATGGACACAGACCTAGATGTGACTCAACAAGATTATGTTAAAACTGCACAAGATAGTGGAAAAGCTTTGGTATCACTGATAAATGAGGTTTTGGATCAGGCAAAAATCGAATCTGGAAATCTCGAACTTGAAGCAATACCGTTCAATCTGCGACCAATTTTGGATGATATTTTGTCACTCTTTTCTGGGAAATCTCAAGAAAAAGGACTGGAGCTAGCAGTTTTCATCTCAGATAATGTTCCTGAGATGCTAATTGGTGATCCTGGAAGGTTTAGGCAGATCGTCACAAATCTTATGGGAAACTCAATCAAGGCAAGTGATGCAAAGAAGGGACACATATTTGTCACAGTTAATCTCGTCGAGGAGGTTATTGAATCAATTGATCTCGAGATCGAGTCTTCAACGAAGAGCACCTTGAGTGGCTATCCTACTGCCAATAGACGCCTCAGCTGGACAGGTTTCAGAACGTTTGATCAAGAGGATCCTGCTGCTTGTCATTTCCTGCCATCTCCATCGGACCTTGTTAACCTTATAGTATCCGTGGAAGATACAGGTGTCGGTATTCCTTTAGAAGACCAATCACGTGTTTTCACTCCCTTCATGCAGGTTCGACCATCCATCTCTAGAACTCATGGGGGAACAGGTATCGGTCTGAGTATTAGCAAATGTTTGGTTGGCCTCATGAAGGGGGAGATCGGGTTTGTGAGTGTGCCAAAGATCGGCTCTACCTTCACATTTACTGCGGTTTTCACAAATGGCTCTTCCAATTCGAGCGAGTATAACAAATCTCAGCAAATTAAGACCACGTCCATCTCGGCATCCTCCGAATTTAAGGGTATGAGGGCTTTAGTTGTGGACCATCGACCCATTCGGGCCAAGGTATCAAGATATCATATCCGACGTCTTGGAATAAATGTTGAATCATCGTCCGACTTGAATCAATGTCTGTCTAACATGAGTGTGGGTGGTACAACTATGAATATGATTTTTGTTGAGCAAGATCTTTGGGATCAGGATACCAGTACATCAGATCTCTTTATCAAGAACTTAAGAAATTCTTATGGCGTTCCTCCCAAACTATTTCTTCTTACTAGCTCCATTAGTTCTTCAAAAGCTAGTACTATAAATTCTGATGTACTCACTCCCACAGTCATCCTAAAGCCCTTGAGGGCGGGCATGCTTGCTGCCTCACTTCACAGAGTAATGGGCGTCGGGATCAAGGGTAATCCTCAGCTTCCTGTTCTCTCTCTCCGTAATCTACTCCGTGGTCGGAAAATTCTCATTGTAGATGACAATAAGGTGAACCGTATAGTCGCTGCTGGTGCTCTAGAACGGTACGGTGCTGATGTAGTATGTGAAAACAGTGGAAGAGATGCAATCCGACTGCTTACACCGCCCCATCGTTATGATGCATGTTTCATGGATATTCAGATGCCAGAGATGGATGGGTTTGAAGCTACAAGAAGAATCCGGGAAATCGAACACCATATCAACGACGGTATTCAACTTGGAGAGCTATCAAAAGAAGCATACGAAAATAAGTGTTATTGGCGTGTACCCATTTTGGCCATGACTGCAGACGTAATCCAGGCTACACACGAGGAATGCCTTCGGTATGGGATGGATGGATATGTTTCAAAGCCATTCGAAGTCGAACGACTTTATCGAGAAGTTTCTCAATTTTTCCACAGTACCTCAAATGGAACTTTATAG 3048 44.32 LWLISMNWFINGGAMETKAGLVGGGGKIWLQLWGKVIGNCCKIHHQYYQYIGSKKFRKTWWRRLLLGWVIGWTLASLWIFHYMSSQATEKRKETLGSMCDERARMLQDQFNVSMNHIQAMSILISTFHHGKNPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREHFEKQQGWTIKRMDKIEQSPVHEDDYAPEALEPSPTQEEYAPVIFAQDTISHVVSLDMLSGKEDRKNVLRARASGKGVLTAPFRLIKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDIESLVEKLLQQLASNQTILVNVYDTTNQSHPISMYGKDTSEDGLQRISPLNFGDPDRKHEMRCRFKQKQPWPWLAITTSIGVLIIALLLGYIFHAALNRIAKVEDDYHDMMELKKRAEDADVAKSQFLATVSHEIRTPMNGVLGMLHLLMDTDLDVTQQDYVKTAQDSGKALVSLINEVLDQAKIESGNLELEAIPFNLRPILDDILSLFSGKSQEKGLELAVFISDNVPEMLIGDPGRFRQIVTNLMGNSIKASDAKKGHIFVTVNLVEEVIESIDLEIESSTKSTLSGYPTANRRLSWTGFRTFDQEDPAACHFLPSPSDLVNLIVSVEDTGVGIPLEDQSRVFTPFMQVRPSISRTHGGTGIGLSISKCLVGLMKGEIGFVSVPKIGSTFTFTAVFTNGSSNSSEYNKSQQIKTTSISASSEFKGMRALVVDHRPIRAKVSRYHIRRLGINVESSSDLNQCLSNMSVGGTTMNMIFVEQDLWDQDTSTSDLFIKNLRNSYGVPPKLFLLTSSISSSKASTINSDVLTPTVILKPLRAGMLAASLHRVMGVGIKGNPQLPVLSLRNLLRGRKILIVDDNKVNRIVAAGALERYGADVVCENSGRDAIRLLTPPHRYDACFMDIQMPEMDGFEATRRIREIEHHINDGIQLGELSKEAYENKCYWRVPILAMTADVIQATHEECLRYGMDGYVSKPFEVERLYREVSQFFHSTSNGTL 1015
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 832106 840950 - MC07g0063 Mch7g0079 692417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0079 1015 Gene3D - 483 701 IPR036890 -
Mch7g0079 1015 Coils Coil 396 416 - -
Mch7g0079 1015 SUPERFAMILY CheY-like 721 848 IPR011006 -
Mch7g0079 1015 FunFam Histidine kinase 4 136 365 - -
Mch7g0079 1015 Gene3D - 869 1012 - -
Mch7g0079 1015 Gene3D - 83 135 - -
Mch7g0079 1015 CDD PRTases_typeI 822 896 IPR000836 -
Mch7g0079 1015 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 473 692 IPR036890 -
Mch7g0079 1015 ProSiteProfiles Response regulatory domain profile. 870 1007 IPR001789 GO:0000160(InterPro)
Mch7g0079 1015 CDD REC_hyHK_CKI1_RcsC-like 871 1003 - -
Mch7g0079 1015 Pfam His Kinase A (phospho-acceptor) domain 419 484 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch7g0079 1015 Pfam Response regulator receiver domain 871 1002 IPR001789 GO:0000160(InterPro)
Mch7g0079 1015 Gene3D CHASE domain 136 365 IPR042240 -
Mch7g0079 1015 Gene3D - 388 482 - -
Mch7g0079 1015 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 621 693 IPR003594 -
Mch7g0079 1015 SMART HKATPase_4 531 697 IPR003594 -
Mch7g0079 1015 CDD HATPase_EvgS-ArcB-TorS-like 536 695 - -
Mch7g0079 1015 SMART REC_2 869 1003 IPR001789 GO:0000160(InterPro)
Mch7g0079 1015 PRINTS Bacterial sensor protein C-terminal signature 657 675 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch7g0079 1015 PRINTS Bacterial sensor protein C-terminal signature 640 650 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch7g0079 1015 PRINTS Bacterial sensor protein C-terminal signature 622 636 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch7g0079 1015 ProSiteProfiles CHASE domain profile. 132 358 IPR006189 -
Mch7g0079 1015 ProSiteProfiles Response regulatory domain profile. 726 847 IPR001789 GO:0000160(InterPro)
Mch7g0079 1015 PANTHER TWO-COMPONENT HISTIDINE KINASE 48 1006 IPR050956 -
Mch7g0079 1015 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 405 485 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch7g0079 1015 ProSiteProfiles Histidine kinase domain profile. 426 697 IPR005467 -
Mch7g0079 1015 Pfam CHASE domain 135 331 IPR006189 -
Mch7g0079 1015 SMART CHASE_2 132 333 IPR006189 -
Mch7g0079 1015 SMART HisKA_10 419 484 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch7g0079 1015 FunFam Histidine kinase 4 391 482 - -
Mch7g0079 1015 SUPERFAMILY CheY-like 866 1007 IPR011006 -
Mch7g0079 1015 CDD HisKA 419 480 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0340 Mch-Chr4:2115024 Mch7g0079 Mch-Chr7:832106 0 dispersed
Mch7g0079 Mch-Chr7:832106 Mch9g1183 Mch-Chr9:12702790 0 dispersed
Mch7g0079 Mch-Chr7:832106 Mch7g0796 Mch-Chr7:12608728 2.12E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43686 PF03924 CHASE 4.30E-38 CL0165 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0079 K14489 - csv:101216313 1803.1