Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0083 GAATTTGAGAAAAGAAACAAGAAAGAAAAGAACAAAGGAGGAGTTGGAAAATTAAGGAATGGAGAGTCCAATTCCCTCATTCCCCTCTTTAGGGAGCCAAGTAGTGTTGAGAAGATCTTCTTGGATTTTGAGAGGGAGCAACAAAGAGTAGCATTTAGGCCTTCCTCACCACCAACCCCTCCCTTTGTTACTCCCAGAAATGCTTCTCCAAGGGCTATTTCTCCGAGAACCTCCTCCGCTCGACGACCCTCCTTGCCCATCTCTCCTCCCAGAGCTCTTTCTCCGAGGGTCGTAAACCGCCCTAAGGGGTTTCGCTTTCGACCTGAGCCGACTCTTCGGAACCACCATGCTTCTGCAACAAAGATTCAAGCAGCATATAGAGGTTATGTGGCGAGGAGGAGCTTTAGAGCACTAAAGGGGCTGATGAGACTTCAAGGAGTGGTGAGAGGGCAGAACGTGAAGCGGCAGACGGCGAACGCAATGAAGCAGATGCAGCTGTTGGTGAGGGTTCAGTCTCAGATTCAGTCACGTCGAATTCAGATGCTCGACATTCAGCCTCGCCACCAGAATCAGGATGCCGATAATGCCTTGGGCAAATGGAGCTTCACTCAACCTTCTGAGGCAGGTAATCAAGAAGATTGGGATGATAGCTTGCTAACAAGAGAGGAAATAGAAGCAAGATTGCAAAGAAAAGCTGAGGCTATAATCAAGAGAGAGCGAGCAATGGCTTATGCATATTCTCATCAGTTGTGGAAGGCCAGTCCAAACTCAGCTCAAGCTGTTATGGCAGATCTTAGATCCGCAGGATTTCCATGGTGGTGGAATTGGTTAGAGCGTCAATTGCCTCCCTCAAATGTTCCTTCTGAACCTCAAACTCTCAAAAATTTCCTACTTGCACCTCCAACTCCACAACCAAAGCAAACCCCAAGCAACAACAACATGGATCAAACTCTCACACCAAAGTCTACGAAATCGACCATCCTCCCAACGACGAAACCCTCGCGAAACTCACCAGCATTCCGAACCCCTCCCCCCGCGTTTCGAACCCCGCCCGCCAGCTCGAGATATTCAAGGCCAAGAGGCAATGGAATCGATTCACCATTCGACGTGCCGCTAAAGGACGATGATAGCCTCACAAGTTGCCCTCCTTTCTCGGTCCCGCACTACATGGCTCCCACGGTCTCGGCCAAGGCCAAGCTAAGAGGCAGTAGCACCCCGAAAGAGCGGTTCGTCGTCGTGACCCCGACCAGCGAGTCGAAAAGGAGGATATCATTCCCTTTCACACAAGGGTTGGGATCTTTCAAGTGGAACAAAGGCAACTTGTTCTCAAACAAGGATTCAAGCTCTCAAAGGGTTTTGGACAAGAATCAATCCTTGCAATCTGCGGGCAATTTGAGTGTGGATTCTACTGTTTCCTTGCCTGCTGGGGTTGGAAGGAAGCCATTTAACAGATTTGTG 1458 49.52 EFEKRNKKEKNKGGVGKLRNGESNSLIPLFREPSSVEKIFLDFEREQQRVAFRPSSPPTPPFVTPRNASPRAISPRTSSARRPSLPISPPRALSPRVVNRPKGFRFRPEPTLRNHHASATKIQAAYRGYVARRSFRALKGLMRLQGVVRGQNVKRQTANAMKQMQLLVRVQSQIQSRRIQMLDIQPRHQNQDADNALGKWSFTQPSEAGNQEDWDDSLLTREEIEARLQRKAEAIIKRERAMAYAYSHQLWKASPNSAQAVMADLRSAGFPWWWNWLERQLPPSNVPSEPQTLKNFLLAPPTPQPKQTPSNNNMDQTLTPKSTKSTILPTTKPSRNSPAFRTPPPAFRTPPASSRYSRPRGNGIDSPFDVPLKDDDSLTSCPPFSVPHYMAPTVSAKAKLRGSSTPKERFVVVTPTSESKRRISFPFTQGLGSFKWNKGNLFSNKDSSSQRVLDKNQSLQSAGNLSVDSTVSLPAGVGRKPFNRFV 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 896691 898578 - MC07g0067 Mch7g0083 692421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0083 486 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515(InterPro)
Mch7g0083 486 PANTHER IQ-DOMAIN 5-RELATED 84 430 - -
Mch7g0083 486 MobiDBLite consensus disorder prediction 285 364 - -
Mch7g0083 486 MobiDBLite consensus disorder prediction 308 337 - -
Mch7g0083 486 MobiDBLite consensus disorder prediction 1 16 - -
Mch7g0083 486 ProSiteProfiles IQ motif profile. 115 143 - -
Mch7g0083 486 MobiDBLite consensus disorder prediction 50 97 - -
Mch7g0083 486 MobiDBLite consensus disorder prediction 1 28 - -
Mch7g0083 486 Pfam Protein of unknown function (DUF4005) 362 430 IPR025064 -
Mch7g0083 486 Gene3D - 100 135 - -
Mch7g0083 486 SMART iq_5 114 136 IPR000048 GO:0005515(InterPro)
Mch7g0083 486 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1577 Mch-Chr4:19064676 Mch7g0083 Mch-Chr7:896691 1.05E-21 dispersed
Mch5g0018 Mch-Chr5:147548 Mch7g0083 Mch-Chr7:896691 4.35E-20 dispersed
Mch7g0083 Mch-Chr7:896691 Mch9g1765 Mch-Chr9:19578536 1.46E-18 dispersed
Mch7g0083 Mch-Chr7:896691 Mch4g2077 Mch-Chr4:22941834 6.42E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0083 - - - 0.0