Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0125 ATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAAGCTTCTTCCACCAAAGCCATGATCTTCCCATCTCCATAGACATGCAGAGCTCCAACCAGCTCAGCCACACCTCCACCAGCCAGTCGTCGGAGTTCTCGCCGGACCGCTCTCCCTCCGCTGCCGGCGCTGCCGGAAAATGGGCCTCCACCCTTCTCAAGGAGTGTGCCAAAGCCATCTCTGAAAAGGACTCCAACAAAATCCACCATTTTCTGTGGATGTTGAACGAGCTGGCCTCCCCCTATGGCGATTCCGATCAGAAACTGGCCTCTTACTTCTTGCAAGCGCTGTTCTGCAGGGCCACGGAAACCGGGCAGAGCTGCTACAAAACCCTAGTCGCCGTGGCAGAGAAGAACCACTCCTTCGACTCTGCTCGAAGGTTGATCCTCAAGTTTCAAGAGGCGAGTCCGTGGACAACGTTTGGGCACGTGGCTTCGAACGGTGCGATTCTCGAGGCACTCGAGGGAGAGACGAAGCTCCACATCATCGACATTAGCAACACTCTCTGCACCCAGTGGCCAACCCTACTCGAGTCGCTCGCCACCCGAAACGACGACACGCCGCATCTCAAGCTCACCGTGGTGATAACAACCACAATAGTGAAGCCAGTGATGAAGGAAATTGGGCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCCTTCGAGTTCAACCCCATAACAAATCTCAACCACTTGACCGAGCTCACAAAGGAAGCCCTCAAAGTTGAAGAAGACGAAGCCATAGCCATAAATTGCATTGGAGCCTTGAGGAGAGTGAGAATAGAAGAAAGAAACAATGTGATCACAATGTTCAAGTCACTAAACCCTCGAGTTTTGACAATTGTGGAGGAAGAAGCCGATTTCATAAGCTCCAAAAATGACTTCCAAAAGTGCTTTGAAGAGTGCCTTAGATTCTACACTCTCTACTTTGAGATGTTGGAGGAGAGCTTTGTGGCAACAAGCAATGAGAGGTTGGTTTTGGAGAGAGAGTGTTCAAGAAGCATAGTGAGGCTTTTGGGGTGTGATGAGAGTGAGGGAGAAATGGGAAGTGAGAGGAGAGAGAGAGGGAGGCAATGGAGCAAAAGGCTGAAAGAGGCAGCTTTTTCCTCAGCTGGGTTTAGTGATGATGTGATGGACGATGTCAAGGCCTTGCTCAAGAGGTATAGATCCGGCTGGGCGGTGTCGGATCGACCCGCCGAAGAAGAAGAGGATGCCGAATCAAGGGTCGGAGCTTACTTGACGTGGAAGGAAGAATCAGTGGTGTGGGTTTCAGCATGGAAACCCTAG 1329 51.17 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAGAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPAEEEEDAESRVGAYLTWKEESVVWVSAWKP 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1544238 1546286 + MC07g0084 Mch7g0125 692463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0125 442 Pfam GRAS domain family 63 441 IPR005202 -
Mch7g0125 442 MobiDBLite consensus disorder prediction 33 49 - -
Mch7g0125 442 MobiDBLite consensus disorder prediction 33 54 - -
Mch7g0125 442 ProSiteProfiles GRAS family profile. 52 441 IPR005202 -
Mch7g0125 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 440 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1341 Mch-Chr2:9494540 Mch7g0125 Mch-Chr7:1544238 4.52E-133 dispersed
Mch4g0210 Mch-Chr4:1375170 Mch7g0125 Mch-Chr7:1544238 4.79E-53 dispersed
Mch7g0125 Mch-Chr7:1544238 Mch9g0222 Mch-Chr9:1668858 2.91E-41 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43687 PF03514 GRAS 1.90E-96 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0125 K27743 - csv:101206730 713.375