Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g0520 | ATGTCGATGAGTAGTAGTGAAATCGAAAGCCTTTGGGTTTTTGCGCTGGCTTCCAAATGCTCCGCTTTAACCCAAGAAAACATCCTCTACTCCTTCCTCTTGTTTTTCTTTATTTGGTTTGTTGTCTCCATTTTCTATTGGGCCCATCGTGGCGGCCCGGCTTGGGGCCGCTACGGGTGGCGCCATCGCCGCAGCGCTGCCTCCTCGACCTCCATCCCCGGCCCGAGAGGCCTCCCGGTGATCGGGAGCATGTCCCTGATGTCCGGGTTGGCCCACCACAAGATCGCCGCCATGGCTCACTCCCTTGGCGCCACCCGGCTGATGGCCTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCAACCCTGACGTGGCCAAGGACATCCTTAACAGCTCGGTCTTTGCGGACCGTCCGATCAAGGAATCCGCTTACTCGCTGATGTTCAATCGCGCCATTGGATTCGCCCCCTACGGCCTCTACTGGCGGGCGCTACGACGCATCGCTTCCCACCACCTCTTCTGCCCCAAGCAAATCAAGGCCTCCGAGTCCCAGCGCCGACACATCGTTTCCCAAATGGTCGCAATGTTCGCAGCCCCCCAACCGACGACATGTCGTCCCAACAGTACTAGTAGTAATTCCAGTTTCCTTGTACGGGACGCGTTCAAGCGGGCTTCCCTCAACAACATGATGGGCTCGGTCTTCGGCCGGCTTTACGACCTCTCCGGTTCGGTCTACAATCACGAGGTCGAGGAACTCAAGAGCCTGGTCGACGAAGGCTACGATTTGTTGGGCCTACTCAACTGGTCCGACCATCTCCCCTTACTGGCCGGGTTCGACCCGCAGAAAATCCGGTCCAGATGCTCCCGGCTCGTCCCCAAAGTGAACCGCTTTGTTGGCCGGATCATCGCCCAACACCGCCAAAAATCCGACAAGCAAGTCATGGATTTCGTCGATGTTCTCCTCTCTCTCCAGGAATCCGACAAACTCTCTGACTCCGATATGATCGCCGTTCTTTGGGAAATGATTTTTCGTGGGACGGACACGGTGGCAGTTTTAATGGAGTGGATACTGGCGAGGATTGTACTTCACGAGGATGTGCAGACAAAAGTTCAGGAGGAGCTGGACAACGTGGTGGGGAAATCACGCGCCGTCGCGGAATCCGACATTCCGTCGCTGGTGTATCTAACGGCTGTGATTAAGGAAGTTCTGAGGTTGCATCCGCCGGGCCCACTCCTGTCGTGGGCCCGCCTGGCCATCACCGATACAACCATCGATGGGCATCACGTGCCTGCGGGGACCACAGCAATGGTGAACATGTGGTCGATAGCACGGGACCCACGCGTCTGGTCGGACCCACTCGAGTTCATGCCCCAGAGGTTTGTGTCCGGCGCCGGTGCCGGCGACGTGGAGTTTTCGATCATGGGTTCGGATCTCCGCCTGGCTCCGTTCGGGTCGGGTCGGAGGACTTGCCCCGGAAAGGCTCTTGCCTGGACAACTGTCACCTTCTGGGTGGCCACGCTTTTGCACGACTTTAAGTGGTCGTCGCCGTCTGACCAAAACGACGCCGTTGACTTGTCCGAGGTTCTGAAGCTCTCTTGTGAGATGGCCAATCCCCTCGCCGTTAAAGTACGCCCAAGGCGCAGTTTAAGCTTTTGA | 1659 | 57.44 | MSMSSSEIESLWVFALASKCSALTQENILYSFLLFFFIWFVVSIFYWAHRGGPAWGRYGWRHRRSAASSTSIPGPRGLPVIGSMSLMSGLAHHKIAAMAHSLGATRLMAFSLANTRVIVTCNPDVAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRALRRIASHHLFCPKQIKASESQRRHIVSQMVAMFAAPQPTTCRPNSTSSNSSFLVRDAFKRASLNNMMGSVFGRLYDLSGSVYNHEVEELKSLVDEGYDLLGLLNWSDHLPLLAGFDPQKIRSRCSRLVPKVNRFVGRIIAQHRQKSDKQVMDFVDVLLSLQESDKLSDSDMIAVLWEMIFRGTDTVAVLMEWILARIVLHEDVQTKVQEELDNVVGKSRAVAESDIPSLVYLTAVIKEVLRLHPPGPLLSWARLAITDTTIDGHHVPAGTTAMVNMWSIARDPRVWSDPLEFMPQRFVSGAGAGDVEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHDFKWSSPSDQNDAVDLSEVLKLSCEMANPLAVKVRPRRSLSF | 552 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 8838912 | 8841424 | + | MC07g0262 | Mch7g0520 | 692858 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g0520 | 552 | SUPERFAMILY | Cytochrome P450 | 72 | 547 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PANTHER | CYTOCHROME P450 78A7-RELATED | 1 | 543 | IPR051996 | - | |
| Mch7g0520 | 552 | PRINTS | P450 superfamily signature | 345 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | P450 superfamily signature | 491 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | P450 superfamily signature | 398 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | P450 superfamily signature | 482 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | Gene3D | Cytochrome P450 | 59 | 550 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | CDD | CYP78 | 103 | 540 | - | - | |
| Mch7g0520 | 552 | FunFam | Cytochrome P450 78A5 | 64 | 547 | - | - | |
| Mch7g0520 | 552 | Pfam | Cytochrome P450 | 73 | 521 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 225 | 243 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 397 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 481 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 334 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 354 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 439 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | PRINTS | E-class P450 group I signature | 491 | 514 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0520 | 552 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 484 | 493 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1935 | Mch-Chr2:20037634 | Mch7g0520 | Mch-Chr7:8838912 | 7.36E-149 | dispersed | |
| Mch7g0520 | Mch-Chr7:8838912 | Mch9g2364 | Mch-Chr9:23584780 | 2.13E-155 | dispersed | |
| Mch7g0520 | Mch-Chr7:8838912 | Mch8g0146 | Mch-Chr8:907537 | 9.78E-172 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch7g0520 | K20619 | - | csv:101216159 | 815.453 |