Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0643 ATGGAGACCGATCAGAACGTCAGGGGAGTGCCCACCCATGGCGGCCGATATATTCAATACAATGTCTATGGGAATCTATTTGAAGTTTCTAGAAAGTATATTCCCCCCATAAGGCCAGTTGGTAGAGGGGCTTATGGTATTGTCTGTGCTGCTTTTAATTCAGAAACAAATGAGGAGGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAATAGAATTGATGCTAAAAGAACCTTGCGAGAAATCAAGCTTCTTCGACACATGGATCACGAAAATATCATTGCTCTCAAAGATATTATGAGACCTCCTCAGAAGGAGAATTTCAATGATGTGTACCTTGTTTATGAATTGATGGATACTGATCTAAACCAGATAATACGGTCCAACCAATCATTGACCGATGATCATTGCCGGGTTGGAACCTCTCATCTTCTTGCAAATACATACTTTCTGTACCAGTTGTTGCGAGGGCTCAAGTACGTACATTCTGCTAATGTTCTACATCGTGATCTGAAACCTAGCAATTTGTTCCTCAATGCAAATTGTGATCTAAAAATTGGAGACTTCGGGCTTGCAAGGACAACTTCCGAAACTGATTTTATGACCGAGTACGTTGTTACTCGCTGGTACCGTGCACCAGAATTGCTTCTTAATTGTTCAGAATACACTGGAGCAATAGATATCTGGTCTGTTGGATGTATACTTGGTGAAATTATGCACAGAAAACCACTGTTTCCTGGAAGGGATTATGTCGATCAGCTAAGACTTATTACTGAGCTCATTGGGTCACCCGATGACTCGAGCCTCGGATTCTTACGAAGCGACAATCCACGGAGATATTTTAGACATCTTCCCCACTACCCCAGGCAACAGTTTTCCACTAGATTTCCCACAATGTCTCCTGCTGCCATCGACTTGCTCGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGACGAGGCGCTGTGCCATCCGTACTTGGCACCTCTTCATGATATCAATGAGGAGCCAGTGTGTCCGAGGGCTTTCAGTTTTGATTTCGAGCAACCATCGTATACCGAAGAAAACATCAAGGAACTTGTATGGAGAGAATCTGAGAAGTTTAACCCAGGTCCCACTTTTTGA 1134 42.95 METDQNVRGVPTHGGRYIQYNVYGNLFEVSRKYIPPIRPVGRGAYGIVCAAFNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIMRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRVGTSHLLANTYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRKPLFPGRDYVDQLRLITELIGSPDDSSLGFLRSDNPRRYFRHLPHYPRQQFSTRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDINEEPVCPRAFSFDFEQPSYTEENIKELVWRESEKFNPGPTF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11080539 11086352 + MC07g0330 Mch7g0643 692981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0643 377 SMART serkin_6 34 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0643 377 CDD STKc_TEY_MAPK 27 373 - -
Mch7g0643 377 FunFam Mitogen-activated protein kinase 19 128 - -
Mch7g0643 377 Pfam Protein kinase domain 38 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0643 377 Gene3D Phosphorylase Kinase; domain 1 17 367 - -
Mch7g0643 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 27 366 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch7g0643 377 Gene3D Transferase(Phosphotransferase) domain 1 118 357 - -
Mch7g0643 377 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524(InterPro)
Mch7g0643 377 SUPERFAMILY Protein kinase-like (PK-like) 37 337 IPR011009 -
Mch7g0643 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch7g0643 377 FunFam Mitogen-activated protein kinase 118 357 - -
Mch7g0643 377 ProSiteProfiles Protein kinase domain profile. 34 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2418 Mch-Chr6:26093958 Mch7g0643 Mch-Chr7:11080539 4.64E-227 dispersed
Mch7g0643 Mch-Chr7:11080539 Mch8g0797 Mch-Chr8:5630872 7.96E-141 dispersed
Mch7g0643 Mch-Chr7:11080539 Mch8g0123 Mch-Chr8:720477 8.21E-193 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77542 PF00069 Pkinase 3.10E-67 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0643 K20600 - csv:101215189 709.909