Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0647 ATGGGTTTTCCGGTGGGTTGCACGGAGGTATTCTTCCCGACAATTTTCCTCCACTTCCTCTCCCTCCTCGATTTCCTCAAAAAGCTCATTCTGACGCTCTTCCGCCTGCTGGGCCTGCCGGAGTTTATCGAGACGGACGGAATCTGGCCGGAGCCCCGATTGCCCGCCAACCCGCCCGCGTCGGCCGTCCTGATCCGCGAATTCCTGCCGGTCGTCAAATTCTCCGACGTCGCCGAGGCCTCCGGCGGCGAGAGCTGCGCCGTTTGCCTGTACGAGTTCGAGGCGGCGGAGGAAATCCGGTGGCTGACGAATTGCCGGCATATTTTTCACCGGGGGTGTCTGGACCGTTGGATGGATCACGATCAGAAGACGTGTCCGCTGTGCAGGACGCCGTTTGTCCCAGATGGGATGCAGGACGAGTTCAATCAACGGCTCTGGGCCGCCTCCGGAATCGCTGAGTTCGATCCCGAGTTCAACTCGGTTTTAGGT 489 60.12 MGFPVGCTEVFFPTIFLHFLSLLDFLKKLILTLFRLLGLPEFIETDGIWPEPRLPANPPASAVLIREFLPVVKFSDVAEASGGESCAVCLYEFEAAEEIRWLTNCRHIFHRGCLDRWMDHDQKTCPLCRTPFVPDGMQDEFNQRLWAASGIAEFDPEFNSVLG 163
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 11130262 11130750 + MC07g0333 Mch7g0647 692985
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0647 163 Pfam Ring finger domain 85 129 IPR001841 -
Mch7g0647 163 SUPERFAMILY RING/U-box 85 135 - -
Mch7g0647 163 SMART ringv_2 85 129 IPR011016 GO:0008270(InterPro)
Mch7g0647 163 PANTHER RING ZINC FINGER PROTEIN-RELATED 10 136 - -
Mch7g0647 163 SMART ring_2 86 128 IPR001841 -
Mch7g0647 163 FunFam RING-H2 finger protein ATL73 65 136 - -
Mch7g0647 163 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mch7g0647 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 135 IPR013083 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0458 Mch-Chr2:3340651 Mch7g0647 Mch-Chr7:11130262 2.07E-15 dispersed
Mch6g2410 Mch-Chr6:26023092 Mch7g0647 Mch-Chr7:11130262 4.61E-54 dispersed
Mch6g2369 Mch-Chr6:25572383 Mch7g0647 Mch-Chr7:11130262 1.28E-14 transposed
Mch5g0404 Mch-Chr5:2769373 Mch7g0647 Mch-Chr7:11130262 1.37E-50 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0647 K16281 - csv:101220424 239.195