Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g0666 | ATGGACGTGGGCTTGGCGTTAGTTATAGTAACGGCGGTGACGGCGTACCTGCTGTGGTTCACGTTCATTTCACGGACGTTAAAGGGTCCCCAAATGTGGCCGTTACTCGGCAGCCTCCCGGGACTGATCGAGAACTGCGACCGTTTACACGACTGGATCGCCGACAACCTCCGCGCGTGCGGCGGCACGTACCAGACCTGCATCTGGGCAATCCCATTCTTCGCCAGAAAACAAGGCCTCGTGACCGTCACGTGCGACCCGAGAAATCTGGAGCACATTCTCAAGACCCGATTCGACAATTACCCCAAGGGCCCCACGTGGCAGGCCGTTTTTCACGAATTGCTCGGCGAGGGCATCTTCAATTCCGACGGCGACACGTGGCTCTTCCAGAGGAAGACGGCGGCGCTTGAATTTACCACTAGGACCCTCCGCCAAGCCATGGCTCGCTGGGTCAGCCGAGCCATTAAGCTCCGGTTCTGCCCGATCCTCAAGCAAGCCGAGCTGAATTCCGAGGCCATTGACCTTCAGGATGTGTTGTTGCGGCTCACTTTTGATAACATTTGCGGCTTGGCTTTCGGGAAAGACCCGATGACTTGCGCGCCGGGATTCCCCGAAAACGGGTTCGCCACAGCATTCGACCGGGCCACCGAGGCTTCTCTACAGCGGTTTATTTTGCCGGAGGTGCTTTGGAAGTTCAAGAAGTGGCTTCGGCTTGGGATGGAGGTCAGCTTGAGCCGGAGCCTGGTCCATATCGAGGAGTATTTATCCGGTGTGATCGATTCACGTAAGCTCGAGTTGCTGAATCAGACCAAGGACTCGACCCCACACGACGATTTGCTCTCGCGTTTCATGAAGAAGAAAGAATCCTACTCGGACGACTTCCTCCGCCACGTGGCGCTCAACTTCATCCTAGCTGGACGCGACACGTCATCCGTCGCGCTGAGCTGGTTCTTCTGGCTGGTCACGCAGAACCCGTTAGTCGAGGATAAAATCCTCCGCGAGATCTGCACCGTTCTGATCATGACACGTGGCTACAAGATCTCATCATGGCTGGACGAGCCGTTGGGATTCGAGGAAATCGACCGCTTGATTTACCTGAAAGCCGCTCTCACCGAAACCCTAAGGCTGTACCCGTCGGTGCCGGAGGATTCCAAGCACGTCGTCGCCGACGACGTCCTGCCGGACGGGACCTTCGTTCCGGCGGGCTCGTCGGTGACGTACTCGATCTATTCAACGGGGAGGATGAAGTCCACGTGGGGAGAGGACTGCCTCGAGTTCCGGCCGGAGCGGTGGCTGTCGGCGGCCGGCGACAAGTTCGTTCCGCCGGATTCGTACAAATTCGTGTCGTTCAATGCCGGGCCGAGGATCTGTTTGGGGAAGGATTTGGCGTACCTGCAGATGAAGTCGATCGCGGCGGCGGTGCTGCTCCGGCACCGGCTGACGGTGGCGGCGGGGCACAAGGTGGAGCAGAAAATGTCGCTGACGCTGTTCATGAAGTACGGGCTGAAGGTGAACGTCCACCGGCGGGACTTGGAGGGAATTGTGGAAAGTATCAGGGACAAAGAGGGAAAGTTGCAAAGAAAAGAGCCTCCGTTAATCGCCGTCGTTAACTGTAACGGCGGGTGTAACGGAGTCGAA | 1638 | 57.69 | MDVGLALVIVTAVTAYLLWFTFISRTLKGPQMWPLLGSLPGLIENCDRLHDWIADNLRACGGTYQTCIWAIPFFARKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAELNSEAIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFATAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSGVIDSRKLELLNQTKDSTPHDDLLSRFMKKKESYSDDFLRHVALNFILAGRDTSSVALSWFFWLVTQNPLVEDKILREICTVLIMTRGYKISSWLDEPLGFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLSAAGDKFVPPDSYKFVSFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRDLEGIVESIRDKEGKLQRKEPPLIAVVNCNGGCNGVE | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 11314451 | 11316088 | + | MC07g0349 | Mch7g0666 | 693004 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g0666 | 546 | SUPERFAMILY | Cytochrome P450 | 21 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | FunFam | Cytochrome P450 | 21 | 512 | - | - | |
| Mch7g0666 | 546 | PANTHER | CYTOCHROME P450 | 18 | 502 | - | - | |
| Mch7g0666 | 546 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | CDD | CYP86A | 67 | 502 | - | - | |
| Mch7g0666 | 546 | Gene3D | Cytochrome P450 | 24 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | Pfam | Cytochrome P450 | 28 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch7g0666 | 546 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g0666 | 546 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g2401 | Mch-Chr6:25922154 | Mch7g0666 | Mch-Chr7:11314451 | 5.46E-295 | dispersed | |
| Mch7g0666 | Mch-Chr7:11314451 | Mch9g0600 | Mch-Chr9:4444344 | 3.65E-149 | dispersed | |
| Mch7g0666 | Mch-Chr7:11314451 | Mch6g0068 | Mch-Chr6:397319 | 5.55E-98 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch7g0666 | K15398 | - | csv:101221526 | 1021.92 |