Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0670 GTTGATGTGTTGAATAAGTTGAGACATCCAAATATTATGACGCTCATTGGAGCTTGCTCGGAGTCTTGCATTCTTGTTTATGACTATTTCGCCAATGGAAGCCTAGAAGATAGGCTAGCCTGCAAGGACAATTCTTCCCCATTATCATGGAAAACTCGAATACGCATTGCCACACAGTTATGCTCAGCCCTTGTATTTCTTCACACAAACAAACTCTGCAGGGTTATTCACTGCGACTTGAATCCTGCTAATATACTACTAGATGGCAACTACATTCCCAAACTTGCAGGATTTGGCAATTGTCATTTTTTACCTAACGATGAAACTACATCTGTCAGAGCTGACATAGAGAGCAACCATGAGTCTCCGCTCACAACAAAGTTGGACGTTTTTTCATTTGGCATAGTATTGTTAAGGTTGTTAACAGGAAAATCAGACATGATGATAAAATTATTACATGAGGTTCAATTTGCCATAGATGGCCGAAAATTGAAAGATGTATTGGATCCACGAGCCGGGGACTGGCCGTTCGTGCAAGCCGAACAGTTGGCCCAATTGGCATTTAGGTGTTGCAATACAAATAGTATGAAAAGGCCAGACCTTGCGTCTGACGTGTGGAGAGTACTTGAGCCAATGAGGGCTTCTTGTGGAGTTTCACTATCAGTATGCCTAGGCTCTGGGGAGCAACAACTGCAACCTCCTCCTTATTTCATATGCCCCATTTTTCAAGAAGTCATGGAGGATCCTCATGTGGCAGCCGACGGGTTCACCTACGAGGCGGAGGCATTGAGAGGATGGTTGGACAGTGGGCATGACACTTCGCCAATGACGAACCTTAGGCTCGACCACCGAAACCTCGTCCCTAACCGTGCTCTTCGTTCTGCAATTCAGGAATGGTTGCACCAGCCCCAGTAG 915 45.36 VDVLNKLRHPNIMTLIGACSESCILVYDYFANGSLEDRLACKDNSSPLSWKTRIRIATQLCSALVFLHTNKLCRVIHCDLNPANILLDGNYIPKLAGFGNCHFLPNDETTSVRADIESNHESPLTTKLDVFSFGIVLLRLLTGKSDMMIKLLHEVQFAIDGRKLKDVLDPRAGDWPFVQAEQLAQLAFRCCNTNSMKRPDLASDVWRVLEPMRASCGVSLSVCLGSGEQQLQPPPYFICPIFQEVMEDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLRLDHRNLVPNRALRSAIQEWLHQPQ 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11369338 11371861 - MC07g0352 Mch7g0670 693008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0670 304 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0670 304 CDD RING-Ubox_WDSUB1-like 234 289 - -
Mch7g0670 304 Pfam Protein kinase domain 2 200 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0670 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 304 IPR013083 -
Mch7g0670 304 ProSiteProfiles U-box domain profile. 232 304 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch7g0670 304 SUPERFAMILY RING/U-box 227 302 - -
Mch7g0670 304 PANTHER OS02G0152300 PROTEIN 1 297 IPR051348 -
Mch7g0670 304 SUPERFAMILY Protein kinase-like (PK-like) 2 209 IPR011009 -
Mch7g0670 304 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
Mch7g0670 304 Pfam U-box domain 234 302 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch7g0670 304 Gene3D Transferase(Phosphotransferase) domain 1 34 220 - -
Mch7g0670 304 SMART Ubox_2 236 299 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0670 Mch-Chr7:11369338 Mch8g3226 Mch-Chr8:34326654 2.65E-71 dispersed
Mch7g0670 Mch-Chr7:11369338 Mch7g0671 Mch-Chr7:11392352 4.98E-87 tandem
Mch10g0145 Mch-Chr10:871994 Mch7g0670 Mch-Chr7:11369338 1.51E-100 wgd
Mch5g0393 Mch-Chr5:2688821 Mch7g0670 Mch-Chr7:11369338 3.38E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77543 PF00069 Pkinase 6.20E-24 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0670 - - - 0.0