Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g0671 | GTCTTGAATAAGTTGAGACATCCAAATATTGCGACGCTCATTGGAGCTTGCTCGGAGTCTTGCATTCTTGTTTATGACTATTTAGCCAATGGAAGCCTAGAAGATAGGCTAGCCTGCAAGGACAATTCTACCCCATTATCATGGAAAACTCGAATATGTATTGCCACACAATTATGCTCGGCCCTTATATTTCTTCATACAAACAAACTTTGCAGGGTTATTCATCGTGACTTGAAGCCTACAAATATACTATTAGATGCCAACTATGTTCCTAAACTTTCAGGATTTGGCAAATGCCATTTTCTATCTCACGATGAAACTACATCTGTTGGAGATGACATAGAGGGCAACCGTGAGTTTCCGCTCACAACAAAGTTGGACGTTTTCTCATTTGGCGTAGTATTGTTAAGGTTGTTAACAGGAAAATCAGAC | 432 | 39.81 | VLNKLRHPNIATLIGACSESCILVYDYLANGSLEDRLACKDNSTPLSWKTRICIATQLCSALIFLHTNKLCRVIHRDLKPTNILLDANYVPKLSGFGKCHFLSHDETTSVGDDIEGNREFPLTTKLDVFSFGVVLLRLLTGKSD | 144 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 11392352 | 11392783 | - | MC07g0353 | Mch7g0671 | 693009 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g0671 | 144 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 144 | - | - | |
| Mch7g0671 | 144 | Pfam | Protein kinase domain | 1 | 142 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch7g0671 | 144 | SMART | serkin_6 | 1 | 144 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch7g0671 | 144 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 73 | 85 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Mch7g0671 | 144 | ProSiteProfiles | Protein kinase domain profile. | 1 | 144 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch7g0671 | 144 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 142 | IPR011009 | - | |
| Mch7g0671 | 144 | PANTHER | OS02G0152300 PROTEIN | 1 | 143 | IPR051348 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch7g0671 | Mch-Chr7:11392352 | Mch8g0558 | Mch-Chr8:4007667 | 9.62E-36 | dispersed | |
| Mch7g0670 | Mch-Chr7:11369338 | Mch7g0671 | Mch-Chr7:11392352 | 4.98E-87 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 77544 | PF00069 | Pkinase | 9.40E-23 | CL0016 | Mch | PK |
Pathway information