Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0709 ATGAGTTTTGGGGGTTTCCTCGACGGCGGCGGGGGCGGAGGAGGAGGCGGTGGCGCTCGAATTGTAGCCGATTTACCTTACACTAACAACAGCGGCGGCGGCGGAAATATGCCCTCCGGTGCGATTGCTCCGCCGCGCCTCATCACTCAATCGCTCACTAAATCCATGTTCAACTCCCCCGGACTCTCTCTCGCTCTCACGAATATGGACGGGCAAGGGGATTTGGCCGGCCGAATGCCGGAGGGTTTGGAGCATAATGTTGGGAGAAGGACCAGAGAGGAAGAGCACGAGAGTAGATCTGGCAGTGATAATATGGACGGCGGCTCCGGCGACGATCAGGACGCCGCCGACAACCCTCCGAGGAAGAAGCGCTACCACCGACACACTCCTCAACAAATCCAAGAGCTCGAAGCTGTTTTTAAAGAGTGCCCTCATCCTGATGAGAAGCAACGGCTGGAGTTGAGTCGGAGGCTTTGTTTGGAAACTCGACAAGTTAAGTTCTGGTTTCAAAATCGGAGGACCCAGATGAAGACCCAATTGGAGCGCCATGAAAATACTTTGCTTAGACAGGAGAATGATAAGCTTAGAGCTGAGAACATGTCGATTCGAGATGCTATGAGGAATCCAATCTGTTCGAACTGCGGTGGTCCGGCAATTATCGGAGAAATCTCGCTGGAAGAGCAGCAGTTGAGGATCGAGAACGCCCGGTTGAAGGATGAGTTGGACCGGGTCTGCGCGCTTGCCGGGAAGTTTCTCGGGAGACCAATTTCATCGCTGGCTAACTCCATTGCGCCTCCGTTGCCAAGCTCAAGTCTGGAACTTGGAGTTGGGAGTAATGGATTTGGGAGTTTGACCATGGCGACGACAATGCCTATTGGGCCGGATTTTGGAGGTGGGTTATCGGGTAATCTGGCTGTTGTTCCCCCTCCTGGCAGACCGACGCCGGGGCTGGGGCTTGAGCGATCTATGCTACTGGAGCTTGCTTTGGCTGCCATGGATGAGCTGGTTAAAATGGCACAGACAGATGAGCCTCTTTGGATTGGGAGCTTGGAAGGTGGAAGAGAAATACTGAACCAGGAAGAGTACATGAGGACATTCACTCCTTGCATCGGCTTGAAACCGAATGGGTTCGTCACCGAGGCATCGAGAGAAACCGGTATGGTCATCATCAACAGCTTGGCTCTCGTCGAGACATTGATGGACTCGAATCGATGGGCAGAGATGTTTCCATGTATGATTGCCCGAACAACCACCACCGATGTGATCTCCGGTGGCATGGGCGGAACAAGAAATGGCGCACTTCAACTGATGCACGCAGAGCTCCAAGTGCTCTCACCGCTCGTGCCGGTCCGGGAGGTCAATTTCCTGCGCTTCTGCAAGCAGCATGCGGAAGGGGTTTGGGCAGTTGTCGACATATCGATCGACGCCATGAGAGACACTCCCGCCGGTGCTTCCTCATTCATCAACTGCAGAAGGCTTCCTTCTGGCTGTGTTGTTCAAGACATGCCCAATGGATATTCCAAGGTTACGTGGGTGGAACATGCCGAGTATGAAGAAAGCCAAGTCCACCAGCTCTACCGCCCGCTTCTCAGCTCCGGTATGGGCTTCGGCGCCCAGCGGTGGGTCGCCACCCTACAACGGCAATGCGAATGCCTTGCCATCCTTATGTCCTCCGCCGTTCCCATTCGAGACCACACCGCGATAACTGCTGGCGGGCGGAGGAGCATGCTGAAGCTAGCGCAGCGAATGACGGCGAACTTCTGTGCAGGGGTGTGCGCCTCGACGGTGCACAAATGGAACAAGCTGAACGCGGGGAGCGTGGACGAGGACGTGCGTGTGATGACACGGAAGAGTGTGGACGACCCGGGGGAGCCACCGGGGATTGTGTTGAGCGCAGCAACGTCGGTGTGGCTCCCGGTATCACCTCAACGACTGTTCGACTTCCTCCGGGACGAGCGGCTGAGGAGCGAATGGGACATACTGTCCAACGGCGGCCCCATGCAGGAGATGGCCCATATCGCCAAAGGCCAAGATCATGGCAATTGCGTCTCTCTCTTACGAGCCAGCGCTATGAATGCGAACCAGAGCAGTATGCTGATTCTACAGGAGACGTGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCGCCGGTGGACATACCGGCGATGCACGTGGTGATGAACGGCGGTGACTCGGCGTACGTGGCGCTGCTGCCGTCCGGGTTTGCGATTGTGCCGGACGGGGCGGCGGCGACGACGGCGGCCAATGGGAGCAGTCCAGGTGGCGGGGAGGGCCCGCAAAGGGTGGCCGTAGGTGGGTCCCTCTTGACCGTTGCATTTCAAATTCTGGTGAATAGCCTCCCTACGGCCAAGCTCACCGTAGAATCGGTTGAAACGGTCAACAATCTCATCTCCTGTACCATCCAGAAGATCAAGGCCGCTCTTCAATGTGAA 2454 56.52 MSFGGFLDGGGGGGGGGGARIVADLPYTNNSGGGGNMPSGAIAPPRLITQSLTKSMFNSPGLSLALTNMDGQGDLAGRMPEGLEHNVGRRTREEEHESRSGSDNMDGGSGDDQDAADNPPRKKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGEISLEEQQLRIENARLKDELDRVCALAGKFLGRPISSLANSIAPPLPSSSLELGVGSNGFGSLTMATTMPIGPDFGGGLSGNLAVVPPPGRPTPGLGLERSMLLELALAAMDELVKMAQTDEPLWIGSLEGGREILNQEEYMRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTTTTDVISGGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDISIDAMRDTPAGASSFINCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAVPIRDHTAITAGGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNAGSVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGAAATTAANGSSPGGGEGPQRVAVGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAALQCE 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11725418 11730199 - MC07g0387 Mch7g0709 693047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0709 818 ProSiteProfiles START domain profile. 317 554 IPR002913 GO:0008289(InterPro)
Mch7g0709 818 MobiDBLite consensus disorder prediction 68 129 - -
Mch7g0709 818 SUPERFAMILY Homeodomain-like 104 179 IPR009057 -
Mch7g0709 818 FunFam Homeobox-leucine zipper protein GLABRA 2 326 550 - -
Mch7g0709 818 MobiDBLite consensus disorder prediction 83 102 - -
Mch7g0709 818 Coils Coil 173 205 - -
Mch7g0709 818 SMART HOX_1 120 183 IPR001356 GO:0003677(InterPro)
Mch7g0709 818 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Mch7g0709 818 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 100 818 IPR042160 -
Mch7g0709 818 Gene3D - 109 195 - -
Mch7g0709 818 Pfam START domain 326 551 IPR002913 GO:0008289(InterPro)
Mch7g0709 818 CDD START_ArGLABRA2_like 321 550 - -
Mch7g0709 818 SUPERFAMILY Bet v1-like 319 551 - -
Mch7g0709 818 SUPERFAMILY Bet v1-like 579 812 - -
Mch7g0709 818 CDD homeodomain 121 179 IPR001356 GO:0003677(InterPro)
Mch7g0709 818 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677(InterPro)
Mch7g0709 818 Pfam Homeodomain 122 177 IPR001356 GO:0003677(InterPro)
Mch7g0709 818 Coils Coil 220 240 - -
Mch7g0709 818 SMART START_1 326 551 IPR002913 GO:0008289(InterPro)
Mch7g0709 818 FunFam Homeobox-leucine zipper protein HDG1 109 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0634 Mch-Chr2:4332703 Mch7g0709 Mch-Chr7:11725418 3.61E-275 dispersed
Mch3g1219 Mch-Chr3:15350213 Mch7g0709 Mch-Chr7:11725418 8.33E-232 dispersed
Mch4g0233 Mch-Chr4:1496817 Mch7g0709 Mch-Chr7:11725418 8.39E-272 dispersed
Mch6g2205 Mch-Chr6:24307682 Mch7g0709 Mch-Chr7:11725418 7.24E-204 dispersed
Mch7g0709 Mch-Chr7:11725418 Mch8g2240 Mch-Chr8:25551823 1.57E-182 dispersed
Mch10g0172 Mch-Chr10:1029677 Mch7g0709 Mch-Chr7:11725418 0 wgd
Mch5g0361 Mch-Chr5:2472769 Mch7g0709 Mch-Chr7:11725418 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43703 PF01852 START 3.70E-58 CL0209 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0709 K09338 - csv:101222248 1456.43