Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0712 ATGATTCATAGTGGACTTGATGATATTGGCAAAGCGAAAGCAATTGCAGGGAAAGTGATACAGGAGGTCAATAGAAAATACAAGTGTTTAGAAATTGATCTCGATGGTTTGTACAAGAGAATGCTGCTTCTGAAGAAAAAGAAATATGCAGCTGTAAAGTTGCAGTGCAAGGAAGGAATGCCGTATGAGGTTATTGAGCGCAAGGGTCTTGATATGGTTCGCCGTGACTGGTGTTTATTATCAAAGGAATTAGGAGATTTCTGCTTGGGTCAAATATTGTCTGGAGGGTCATGTGATGATGTCATTGAGTCAATACATGACTCTCTTAGGAAGATACAAGATGATATTAGGAGAGGGCAAGTAGCACTTGAGAAATATATCATCAGGAAGACATTGACTAAGCCACCTGAAGCCTATCCTGATGCCAGAAACCAACCACATGTTCAAGTTGCGCAAAGGTTAAAACAAATAGGTTATCTTACGGGCTGTTATGTTGGTGATACGATCCCGTATATAATTTGCTGTGAGCAGGGATCTACTTCTGGTGGTTCTACAGGCATTGCTCAGCGGGCTAGACATCCTGAAGAACTTAAAAGAGAAGGTGGAAAGTGGATGATTGATACTGATTACTACTTGTCACAGCAGATACACCCTGTGGTCTCTCGTCTATGTGCCTCAATTCAGGGCACAAGCCCAGAATGCTTGGCTCACTGTCTGGGGCTTGATCCATCGAAGTTCAAGATCAAATCATGTGAAGTTTTCAGCAGCGATGTCTCCTCTTCCCTCGTGTCCTGCGTAACTGATGAGCAAAGGTACCTGGACTGTAAACCACTGGTATTGACTTGCCCTAGGTGTTATGGTACTTTCGAAGTTCCTACTATCTTCAGTTCTATATACAAATCAACATATGGAAAGCAAGAAAGACCAGTGGTTGATGAACCTACAAAAAAGTTTTGGAGTAATTTCAAATGTCCAAACTGCAAGGATTTGTTATGGGTCCCTGACGAAGCTAATGCTACGGGTAGGGGTAGAATGACGTGTGGAATGATTTCCAACCAGGTAAAAATGCAAACAGACAGGTTCATTGCAAAGTATTATCATGGCTTAATGATGTGCGACGAGGAAACATGCAAATACACCACATGTATTGTCAACCTTCAACGTGCGGGTGACTCCAAAAAAGAGATTCTCTGCCCAAAATATCCTCAGTGTGATGGGCGTCTCGTAAGAACGTATACTAAGGCGGACTTGTGGAAGCAGATTTGTTATTTTTGTCACGTGTTGGATACTGAACGCTGTATGGAAAAGCTGGAGGTTCATAGAAGGGTAGCTTTAGAAAAAGAAATGGCAAAGATTCGAGCATTGGTAAAGTTGGCTGCATCGACGGTTAATAAGGTTCGATATCGCAGCGCATATGGTTCCATTAAGTTGAAGGATATTGCAGTGAGTTTGCATATGGCACCATGTTAG 1470 42.24 MIHSGLDDIGKAKAIAGKVIQEVNRKYKCLEIDLDGLYKRMLLLKKKKYAAVKLQCKEGMPYEVIERKGLDMVRRDWCLLSKELGDFCLGQILSGGSCDDVIESIHDSLRKIQDDIRRGQVALEKYIIRKTLTKPPEAYPDARNQPHVQVAQRLKQIGYLTGCYVGDTIPYIICCEQGSTSGGSTGIAQRARHPEELKREGGKWMIDTDYYLSQQIHPVVSRLCASIQGTSPECLAHCLGLDPSKFKIKSCEVFSSDVSSSLVSCVTDEQRYLDCKPLVLTCPRCYGTFEVPTIFSSIYKSTYGKQERPVVDEPTKKFWSNFKCPNCKDLLWVPDEANATGRGRMTCGMISNQVKMQTDRFIAKYYHGLMMCDEETCKYTTCIVNLQRAGDSKKEILCPKYPQCDGRLVRTYTKADLWKQICYFCHVLDTERCMEKLEVHRRVALEKEMAKIRALVKLAASTVNKVRYRSAYGSIKLKDIAVSLHMAPC 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11785867 11789840 + MC07g_new0325 Mch7g0712 693050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0712 489 Coils Coil 20 40 - -
Mch7g0712 489 Gene3D Palm domain of DNA polymerase 1 71 IPR023211 -
Mch7g0712 489 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 1 484 - GO:0003682(PANTHER)|GO:0003688(PANTHER)|GO:0003697(PANTHER)|GO:0003887(PANTHER)|GO:0005658(PANTHER)|GO:0006272(PANTHER)|GO:0006273(PANTHER)|GO:1902975(PANTHER)
Mch7g0712 489 Gene3D - 72 253 IPR042087 -
Mch7g0712 489 SUPERFAMILY DNA/RNA polymerases 1 241 IPR043502 -
Mch7g0712 489 Gene3D DNA Polymerase alpha, zinc finger 260 473 IPR038256 -
Mch7g0712 489 FunFam DNA polymerase 70 255 - -
Mch7g0712 489 Pfam DNA Polymerase alpha zinc finger 264 480 IPR015088 GO:0003887(InterPro)|GO:0006260(InterPro)
Mch7g0712 489 Pfam DNA polymerase family B 1 227 IPR006134 GO:0000166(InterPro)|GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1301 Mch-Chr2:9157208 Mch7g0712 Mch-Chr7:11785867 3.94E-286 dispersed
Mch2g1302 Mch-Chr2:9173321 Mch7g0712 Mch-Chr7:11785867 9.55E-273 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0712 K02320 - csv:101211201 720.309