Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0752 CACTCTCTCCCTCCTTTCCTCTCCAAAGATCTCCACCTCCACCCCCACCACGCTTTGTTCCACCACAACTCCGACGACGATCACGGCGGCGACAGCGGCGGCTCCCACAAGAGGGATCGCGAAGAAACTCCTACCACCACGGCAGAGGAGGCTAAAGAAAATTCAAATAATTCATCCTCTCGACGGCCGCGCGGGCGACCGGCGGGCTCCAAGAACAAGCCTAAGCCGCCCATTATCATCACTAGAGACAGCGCCAACGCCCTCCGATCCCACCTCATCGAAATCGCCTCCGCCGCCGACATTTTTGACTCCCTCGCCGCCTTCGCCCGCCGCCGCCAGCGCGGCCTCTGCATTTTGAGCGCCACCGGCACTGTCGCCAACGTCACCCTCCGGCAGCCGGCCGCTGCCGGTGCAGTCATAACCCTACATGGCAGATTTGAAATTCTCTCCCTTTCCGGCTCCTTCCTGCCACCGCCGGCTCCTCCGGGGGCGTCCGGGCTGACCGTTTACTTGGCCGGAGGACAAGGGCAGGTCGTCGGCGGCAACGCGATCGGCCCACTTACGGCGTCCGGCCCGGTGATTATCATGGCTGCTTCTTTCGGGAATGCCGCGTATGAACGCCTCCCAATTGACGACGAGGACGAAACTTCGCCGGCGGCCGAGATGGCCGGAGGACAGCTGCCGCCGCCGCAGCAGATGTTGGGGGATCCAAATGGGGGTTTGTTTCATGGGGTGGCGCAAAATGTGGTGAATTCTTGCCAATTGCCGGCGGAGACGGCGGCGGCGGCGTATTGGGGAACAGGTCGGCCACCGTAT 816 62.75 HSLPPFLSKDLHLHPHHALFHHNSDDDHGGDSGGSHKRDREETPTTTAEEAKENSNNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEIASAADIFDSLAAFARRRQRGLCILSATGTVANVTLRQPAAAGAVITLHGRFEILSLSGSFLPPPAPPGASGLTVYLAGGQGQVVGGNAIGPLTASGPVIIMAASFGNAAYERLPIDDEDETSPAAEMAGGQLPPPQQMLGDPNGGLFHGVAQNVVNSCQLPAETAAAAYWGTGRPPY 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12143320 12144135 - MC07g0422 Mch7g0752 693090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0752 272 MobiDBLite consensus disorder prediction 49 65 - -
Mch7g0752 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 213 - -
Mch7g0752 272 Gene3D - 88 217 - -
Mch7g0752 272 CDD DUF296 89 172 IPR005175 -
Mch7g0752 272 MobiDBLite consensus disorder prediction 19 48 - -
Mch7g0752 272 FunFam AT-hook motif nuclear-localized protein 88 215 - -
Mch7g0752 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 236 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Mch7g0752 272 MobiDBLite consensus disorder prediction 19 78 - -
Mch7g0752 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 200 IPR005175 -
Mch7g0752 272 ProSiteProfiles PPC domain profile profile. 85 223 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0025 Mch-Chr11:199676 Mch7g0752 Mch-Chr7:12143320 2.66E-73 dispersed
Mch5g0321 Mch-Chr5:2192294 Mch7g0752 Mch-Chr7:12143320 1.61E-87 dispersed
Mch6g0415 Mch-Chr6:2752196 Mch7g0752 Mch-Chr7:12143320 2.12E-74 dispersed
Mch6g2578 Mch-Chr6:27638872 Mch7g0752 Mch-Chr7:12143320 8.72E-97 dispersed
Mch7g0752 Mch-Chr7:12143320 Mch7g0794 Mch-Chr7:12564553 4.70E-79 dispersed
Mch10g0229 Mch-Chr10:1411474 Mch7g0752 Mch-Chr7:12143320 6.05E-23 wgd
Mch10g1504 Mch-Chr10:15008879 Mch7g0752 Mch-Chr7:12143320 2.12E-20 wgd
Mch6g2170 Mch-Chr6:24080895 Mch7g0752 Mch-Chr7:12143320 7.40E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0752 - - - 0.0