Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0754 ATGAGTGCCAATCCTAGTACTAGCTCCGGCGGGGGAGGGCCGGGAACGGCGAGTGCCGGCGGCGGCGGCGGCGGAGGAGGTGGAGGAGGAGGGCCATGTGGGGCGTGCAAGTTTTTGAGGAGGAAGTGTGTGCCGGGGTGCATATTTGCGCCTTATTTCGACTCCGAGCAAGGTGCGGCCCACTTCGCGGCGGTGCATAAGGTGTTCGGAGCCAGTAACGTGTCGAAGCTCCTCCTTCATATCCCGGTCCACAAGCGCCTCGACGCTGTCGTCACGATTTGCTACGAGGCTCAGGCTCGCCTCCGAGATCCCGTCTATGGCTGCGTCGCTCATATTTTCGCTCTTCAACAACAGGTTGTGAATTTACAAGCCGAGCTGTCTTACCTTCAAGCACATCTAGCAACACTGGAGCTGCCGTCGCCGCCGAACCCGCCGCCGCCGCCGCCTCCAAGCTTCCCGGCGCAACCGCCGCTGTCCATCTCCGACCTGCCGTCGGCCTCCTCCTTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCCATGGCCCAGCCTGCATGGGCCATGCAACAACGGCTCGACCACCGCCAGTTTGGCGGCGGCGGCGGCTCGTCCACGGCGGCCGGAGAGGGCGATCTTCAGGCCTTGGCCCGTGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGACGCCTCGTCACCGCCGTCCCTCTCCAAA 720 64.17 MSANPSTSSGGGGPGTASAGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLATLELPSPPNPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQRLDHRQFGGGGGSSTAAGEGDLQALARELLHRHGAPPCSDASSPPSLSK 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12166732 12170726 - MC07g0424 Mch7g0754 693092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0754 240 MobiDBLite consensus disorder prediction 138 157 - -
Mch7g0754 240 PANTHER LOB DOMAIN CONTAINING PROTEIN 29 150 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Mch7g0754 240 MobiDBLite consensus disorder prediction 137 160 - -
Mch7g0754 240 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
Mch7g0754 240 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Mch7g0754 240 MobiDBLite consensus disorder prediction 190 240 - -
Mch7g0754 240 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2024 Mch-Chr6:22582221 Mch7g0754 Mch-Chr7:12166732 1.60E-50 dispersed
Mch7g0754 Mch-Chr7:12166732 Mch8g1482 Mch-Chr8:11184109 2.89E-38 dispersed
Mch7g0754 Mch-Chr7:12166732 Mch7g0755 Mch-Chr7:12182975 5.21E-55 tandem
Mch9g0985 Mch-Chr9:8297890 Mch7g0754 Mch-Chr7:12166732 5.62E-49 transposed
Mch9g1540 Mch-Chr9:17704009 Mch7g0754 Mch-Chr7:12166732 1.30E-44 transposed
Mch5g0318 Mch-Chr5:2165835 Mch7g0754 Mch-Chr7:12166732 1.32E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43709 PF03195 LOB 1.40E-38 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0754 K21994 - csv:101220603 345.51