Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch7g0754 | ATGAGTGCCAATCCTAGTACTAGCTCCGGCGGGGGAGGGCCGGGAACGGCGAGTGCCGGCGGCGGCGGCGGCGGAGGAGGTGGAGGAGGAGGGCCATGTGGGGCGTGCAAGTTTTTGAGGAGGAAGTGTGTGCCGGGGTGCATATTTGCGCCTTATTTCGACTCCGAGCAAGGTGCGGCCCACTTCGCGGCGGTGCATAAGGTGTTCGGAGCCAGTAACGTGTCGAAGCTCCTCCTTCATATCCCGGTCCACAAGCGCCTCGACGCTGTCGTCACGATTTGCTACGAGGCTCAGGCTCGCCTCCGAGATCCCGTCTATGGCTGCGTCGCTCATATTTTCGCTCTTCAACAACAGGTTGTGAATTTACAAGCCGAGCTGTCTTACCTTCAAGCACATCTAGCAACACTGGAGCTGCCGTCGCCGCCGAACCCGCCGCCGCCGCCGCCTCCAAGCTTCCCGGCGCAACCGCCGCTGTCCATCTCCGACCTGCCGTCGGCCTCCTCCTTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCCATGGCCCAGCCTGCATGGGCCATGCAACAACGGCTCGACCACCGCCAGTTTGGCGGCGGCGGCGGCTCGTCCACGGCGGCCGGAGAGGGCGATCTTCAGGCCTTGGCCCGTGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGACGCCTCGTCACCGCCGTCCCTCTCCAAA | 720 | 64.17 | MSANPSTSSGGGGPGTASAGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLATLELPSPPNPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQRLDHRQFGGGGGSSTAAGEGDLQALARELLHRHGAPPCSDASSPPSLSK | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12166732 | 12170726 | - | MC07g0424 | Mch7g0754 | 693092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch7g0754 | 240 | MobiDBLite | consensus disorder prediction | 138 | 157 | - | - | |
Mch7g0754 | 240 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 29 | 150 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Mch7g0754 | 240 | MobiDBLite | consensus disorder prediction | 137 | 160 | - | - | |
Mch7g0754 | 240 | Pfam | Lateral organ boundaries (LOB) domain | 32 | 130 | IPR004883 | - | |
Mch7g0754 | 240 | ProSiteProfiles | LOB domain profile. | 31 | 133 | IPR004883 | - | |
Mch7g0754 | 240 | MobiDBLite | consensus disorder prediction | 190 | 240 | - | - | |
Mch7g0754 | 240 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2024 | Mch-Chr6:22582221 | Mch7g0754 | Mch-Chr7:12166732 | 1.60E-50 | dispersed | |
Mch7g0754 | Mch-Chr7:12166732 | Mch8g1482 | Mch-Chr8:11184109 | 2.89E-38 | dispersed | |
Mch7g0754 | Mch-Chr7:12166732 | Mch7g0755 | Mch-Chr7:12182975 | 5.21E-55 | tandem | |
Mch9g0985 | Mch-Chr9:8297890 | Mch7g0754 | Mch-Chr7:12166732 | 5.62E-49 | transposed | |
Mch9g1540 | Mch-Chr9:17704009 | Mch7g0754 | Mch-Chr7:12166732 | 1.30E-44 | transposed | |
Mch5g0318 | Mch-Chr5:2165835 | Mch7g0754 | Mch-Chr7:12166732 | 1.32E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43709 | PF03195 | LOB | 1.40E-38 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch7g0754 | K21994 | - | csv:101220603 | 345.51 |