Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0755 ATGAGCGGCAGCCACGGCGGGGGACCGTGCGGCGCGTGCAAGTTTTTGCGGAGGAAGTGCGTCAAAGGGTGCATTTTCGCCCCGTATTTCGACTCGGATCAAGGCGCTGCCCACTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAATGCCTCCAAGCTCCTCCTCCGCATCCCTCCCCCCAAGCGCCTCGACGCTTGTGTTACACTATGCTATGAGGCTCTCGCTAGAGTTCGAGACCCCGTCTATGGCTGCGTCCCTCATATCTTCTCCCTTCAGCAACAGGTAGTGAGTTTGCAGGCAGAGCTAGCATACATTCAGGCCAGACTTTCCACCTTGCAGCGGCTGTTGCCACGGCCGCTGCACAGCCCTTCCCCGACCGCTCGCCCCACGTCGCTACCCGAAACGGGATCAGGCTCTGACATGGACTTGCTTTCCAATGTTCCTATGCTCCTTGATCCCCTCCAAATTCAGCCACATAATTATGACGAAACCACGAGCTTTCTAAACCCAATTGATCAAGAGCTCGACGAAGATGGCGATCTTCAGTCATTGGCTCGAGAATTCGTGTCGAGGTACTTGCCCGGAGTAAGATTCCGGCCGCCGTGCTCTCAGAGTTGA 621 57.17 MSGSHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLLRIPPPKRLDACVTLCYEALARVRDPVYGCVPHIFSLQQQVVSLQAELAYIQARLSTLQRLLPRPLHSPSPTARPTSLPETGSGSDMDLLSNVPMLLDPLQIQPHNYDETTSFLNPIDQELDEDGDLQSLAREFVSRYLPGVRFRPPCSQS 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12182975 12185950 + MC07g0425 Mch7g0755 693093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0755 206 MobiDBLite consensus disorder prediction 126 140 - -
Mch7g0755 206 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Mch7g0755 206 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Mch7g0755 206 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 128 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Mch7g0755 206 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0318 Mch-Chr5:2165835 Mch7g0755 Mch-Chr7:12182975 2.89E-48 dispersed
Mch7g0755 Mch-Chr7:12182975 Mch9g0985 Mch-Chr9:8297890 7.56E-43 dispersed
Mch7g0754 Mch-Chr7:12166732 Mch7g0755 Mch-Chr7:12182975 5.21E-55 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43710 PF03195 LOB 7.00E-36 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0755 - - - 0.0