Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0771 ATGGATGGACCAACTGGCCGTGGCGGCGGCGGCGGCATGGATATGAATTTACCGAACTATAAGCTTGGGAAAACCCTCGGCATTGGTTCATTTGGGAAAGTAAAAATTGCAGAGCATGCTTTAACTGGTCATAAAGTTGCTATTAAGATCCTTAACCGCAAGAAGATTAAAAACTTGGACATGGAAGAAAAAGTGAGAAGAGAGATTAAAATATTGAGATTGTTTATGCATCCCCACATCATACGGCTCTATGAGGTTATAGAAACTCCATTGGACATTTATGTCGTGATGGAGTATGTAAAATCTGGAGAACTATTCGACTATATTGTAGAAAAGGGAAGGTTGCAGGAAGATGAAGCTCGTAATTTTTTCCAACAGATAATCTCTGGTGTGGAGTACTGCCATAGGAATATGGTTGTTCACAGAGATCTTAAGCCTGAAAATTTGCTTTTAGACTCCAAATGTAATGTGAAGATTGCTGATTTTGGTTTAAGCAATATAATGCGCGACGGTCACTTTCTGAAGACAAGTTGTGGAAGTCCCAATTATGCTGCCCCGGAGGTTATCTCCGGGAAATTATATGCTGGACCTGAAGTAGATGTGTGGAGTTGTGGTGTAATTTTGTATGCTCTTCTATGTGGCACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTCAAGAAAATAAAGGGTGGAATCTATACTCTTCCAAGTCATTTATCATCTGGTGCTAGAGAACTGATTCCTAGTATGCTGGTGGTTGACCCAATGAAGCGCATCACAATCCCTGAGATTCGACAGCACCCATGGTTTCAAGCTCATCTTCCACGCTATCTAGCTGTGCCTCCACCTGATACAATGCAACAAGCAAAAAAGATTGACGAGGACATTCTTCAGGAGGTTGTGAAGATGGGATTTGACAGGAATCAACTGGTGGAGTCTCTCCGTAACCGAATTCAAAATGAGGCCACTGTTGCCTATTATTTGTTGCTGGACAACCGGTTTCGTGTTTCTAGTGGTTACCTTGGAGCCGAGTTTCAGGAGACTATGGAAACAGGTTTCAACCGTATGCACCCTAGTGATGCTACCAGTCCTGCTGTAGGACACCGTCTTCCTGGATATATGGATTATCAAGGAATGGGCTTAAGATCGCAGTTTCCTGTTGAGAGGAAGTGGGCTCTGGGGTTACAGTCTCGAGCTCATCCCCGTGAAATTATGACCGAAGTCCTTAAAGCCCTACGAGAGCTCAATGTGGCTTGGAAGAAGATTGGGCACTACAATATGAAATGCAGGTGGTTACCTGGAATTCCCGGCCATCATGAAGGCATGATTAACAACACTGCTGTGCATAGTAATCATTACTTTGGGGACGAGTCTACGATCATCGAAAATGATGGTGTTGTAAAATCACCAAATGTTATTAAGTTCGAAGTTCAGCTCTACAAAACACGAGAAGAGAAGTATTTGCTTGATCTACAGAGGGTTCAAGGCCCCCAGTTTCTTTTCCTGGACCTTTGTGCCGCCTTCCTTGCCCAGCTCCGAGTCCTCTAA 1554 43.37 MDGPTGRGGGGGMDMNLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRKKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPLDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSGARELIPSMLVVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLVESLRNRIQNEATVAYYLLLDNRFRVSSGYLGAEFQETMETGFNRMHPSDATSPAVGHRLPGYMDYQGMGLRSQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAWKKIGHYNMKCRWLPGIPGHHEGMINNTAVHSNHYFGDESTIIENDGVVKSPNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12338304 12345956 - MC07g0434 Mch7g0771 693109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0771 517 SUPERFAMILY Protein kinase-like (PK-like) 17 290 IPR011009 -
Mch7g0771 517 Pfam UBA/TS-N domain 294 330 IPR015940 -
Mch7g0771 517 FunFam Non-specific serine/threonine protein kinase 11 350 - -
Mch7g0771 517 SMART serkin_6 20 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0771 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch7g0771 517 CDD AMPKA_C 390 514 - -
Mch7g0771 517 Pfam Protein kinase domain 20 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0771 517 SUPERFAMILY UBA-like 282 331 IPR009060 GO:0005515(InterPro)
Mch7g0771 517 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524(InterPro)
Mch7g0771 517 ProSiteProfiles Protein kinase domain profile. 20 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0771 517 Gene3D Transferase(Phosphotransferase) domain 1 13 351 - -
Mch7g0771 517 SMART uba_6 295 332 IPR015940 -
Mch7g0771 517 CDD STKc_AMPK_alpha 17 272 - -
Mch7g0771 517 CDD UBA_SnRK1_plant 294 334 - -
Mch7g0771 517 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Mch7g0771 517 Pfam Kinase associated domain 1 474 516 IPR001772 -
Mch7g0771 517 Gene3D Kinase associated domain 1, KA1 396 515 - -
Mch7g0771 517 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 468 516 IPR001772 -
Mch7g0771 517 SUPERFAMILY KA1-like 329 516 IPR028375 -
Mch7g0771 517 FunFam Non-specific serine/threonine protein kinase 396 515 - -
Mch7g0771 517 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 19 293 - GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch7g0771 517 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 293 333 IPR015940 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1398 Mch-Chr1:15858440 Mch7g0771 Mch-Chr7:12338304 4.74E-65 dispersed
Mch4g0667 Mch-Chr4:4409237 Mch7g0771 Mch-Chr7:12338304 8.36E-64 dispersed
Mch7g0771 Mch-Chr7:12338304 Mch8g2446 Mch-Chr8:27426918 1.16E-230 dispersed
Mch7g0771 Mch-Chr7:12338304 Mch5g0519 Mch-Chr5:3443746 3.95E-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77547 PF00069 Pkinase 7.00E-80 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0771 K07198 - csv:101211720 996.882