Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch7g0794 | CTCTGTTCTCTCACACATATCCATATAAAATTTTATAATAATTCATTCTCAAAAATATATTGTCCCCTTTTTATTATTTTACCATTTATTATTATTATTATTTTTTTGCCCCCCTGGTTTTTTCCCTGTTCATCTTTGTGTTTTAAGTTTCTCTCTCTCTTGTGTTTAATGGCTGCTTTAAACTTGGGCTCCGCTTCTCACTTTGTTGACCAGCTCCAGCACCGCCCTGATCTCCACCTAGAGCCGCCGCCGGATTCCGGCCACTTCAACGGCGGGGGCGATGTCATGGTCCGCCGGCCGAGGGGCCGCCCGGCCGGGTCCAAGAACAAGCCGAAGCCGCCTGTGATCATCACGCGCGAGAGTGCCAACACGCTCCGAGCTCATATCTTGGAGGTCGGTAGCGGCTGCGACGTGTTCGAGGCCGTGGCTGCCTATGCACGGCGGCGCCAACGGGGGATCTGCGTGTTGAGTGGGAGTGGGATAGTGAACAATGTCAGCTTGCGGCAACCCGCAGCGGCGGGCTCGGTGTTGACACTGCAAGGTCGATTCGAGATATTGTCGTTGTCGGGATCGTTTCTGCCACCGCCCGCTCCTCCCGGTGCCACCAGTTTGACGATCTTCTTGGCTGGAGGACAAGGGCAGGTGGTAGGCGGAAATGTGGTGGGAGCTTTGATCGCATCGGGACCGGTCATTGTCATAGCTTCGTCGTTTAGCAACGTGGCGTACGAGAGGTTGCCATTGGATGAAGAAGAAGAATTGCCGATGCAGGCCGGGGCTGGGCCGCAGAGCTCCGGTGGAGGCGGAGACGGCGGCGATAGCCACAACAACCCTTTTCCCGACGCATCTTCCGGCCTGCCCTTCCTTAATCTGCCAATGAACATGCCGAATCAGAACCAATTTTTCGGTTGA | 909 | 54.35 | LCSLTHIHIKFYNNSFSKIYCPLFIILPFIIIIIFLPPWFFPCSSLCFKFLSLLCLMAALNLGSASHFVDQLQHRPDLHLEPPPDSGHFNGGGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFEAVAAYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEEELPMQAGAGPQSSGGGGDGGDSHNNPFPDASSGLPFLNLPMNMPNQNQFFG | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12564553 | 12566089 | + | MC07g0454 | Mch7g0794 | 693132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch7g0794 | 302 | CDD | DUF296 | 126 | 209 | IPR005175 | - | |
Mch7g0794 | 302 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 92 | 294 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch7g0794 | 302 | Gene3D | - | 125 | 257 | - | - | |
Mch7g0794 | 302 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 122 | 252 | - | - | |
Mch7g0794 | 302 | ProSiteProfiles | PPC domain profile profile. | 122 | 259 | IPR005175 | - | |
Mch7g0794 | 302 | FunFam | AT-hook motif nuclear-localized protein | 125 | 252 | - | - | |
Mch7g0794 | 302 | MobiDBLite | consensus disorder prediction | 255 | 290 | - | - | |
Mch7g0794 | 302 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 126 | 238 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1642 | Mch-Chr10:16557884 | Mch7g0794 | Mch-Chr7:12564553 | 5.21E-98 | dispersed | |
Mch6g2170 | Mch-Chr6:24080895 | Mch7g0794 | Mch-Chr7:12564553 | 1.03E-103 | dispersed | |
Mch7g0752 | Mch-Chr7:12143320 | Mch7g0794 | Mch-Chr7:12564553 | 4.70E-79 | dispersed | |
Mch7g0794 | Mch-Chr7:12564553 | Mch8g2974 | Mch-Chr8:32422099 | 1.05E-72 | dispersed | |
Mch5g0275 | Mch-Chr5:1867047 | Mch7g0794 | Mch-Chr7:12564553 | 3.24E-118 | wgd |
Pathway information
