Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0794 CTCTGTTCTCTCACACATATCCATATAAAATTTTATAATAATTCATTCTCAAAAATATATTGTCCCCTTTTTATTATTTTACCATTTATTATTATTATTATTTTTTTGCCCCCCTGGTTTTTTCCCTGTTCATCTTTGTGTTTTAAGTTTCTCTCTCTCTTGTGTTTAATGGCTGCTTTAAACTTGGGCTCCGCTTCTCACTTTGTTGACCAGCTCCAGCACCGCCCTGATCTCCACCTAGAGCCGCCGCCGGATTCCGGCCACTTCAACGGCGGGGGCGATGTCATGGTCCGCCGGCCGAGGGGCCGCCCGGCCGGGTCCAAGAACAAGCCGAAGCCGCCTGTGATCATCACGCGCGAGAGTGCCAACACGCTCCGAGCTCATATCTTGGAGGTCGGTAGCGGCTGCGACGTGTTCGAGGCCGTGGCTGCCTATGCACGGCGGCGCCAACGGGGGATCTGCGTGTTGAGTGGGAGTGGGATAGTGAACAATGTCAGCTTGCGGCAACCCGCAGCGGCGGGCTCGGTGTTGACACTGCAAGGTCGATTCGAGATATTGTCGTTGTCGGGATCGTTTCTGCCACCGCCCGCTCCTCCCGGTGCCACCAGTTTGACGATCTTCTTGGCTGGAGGACAAGGGCAGGTGGTAGGCGGAAATGTGGTGGGAGCTTTGATCGCATCGGGACCGGTCATTGTCATAGCTTCGTCGTTTAGCAACGTGGCGTACGAGAGGTTGCCATTGGATGAAGAAGAAGAATTGCCGATGCAGGCCGGGGCTGGGCCGCAGAGCTCCGGTGGAGGCGGAGACGGCGGCGATAGCCACAACAACCCTTTTCCCGACGCATCTTCCGGCCTGCCCTTCCTTAATCTGCCAATGAACATGCCGAATCAGAACCAATTTTTCGGTTGA 909 54.35 LCSLTHIHIKFYNNSFSKIYCPLFIILPFIIIIIFLPPWFFPCSSLCFKFLSLLCLMAALNLGSASHFVDQLQHRPDLHLEPPPDSGHFNGGGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFEAVAAYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEEELPMQAGAGPQSSGGGGDGGDSHNNPFPDASSGLPFLNLPMNMPNQNQFFG 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12564553 12566089 + MC07g0454 Mch7g0794 693132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0794 302 CDD DUF296 126 209 IPR005175 -
Mch7g0794 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 92 294 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Mch7g0794 302 Gene3D - 125 257 - -
Mch7g0794 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 252 - -
Mch7g0794 302 ProSiteProfiles PPC domain profile profile. 122 259 IPR005175 -
Mch7g0794 302 FunFam AT-hook motif nuclear-localized protein 125 252 - -
Mch7g0794 302 MobiDBLite consensus disorder prediction 255 290 - -
Mch7g0794 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 238 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1642 Mch-Chr10:16557884 Mch7g0794 Mch-Chr7:12564553 5.21E-98 dispersed
Mch6g2170 Mch-Chr6:24080895 Mch7g0794 Mch-Chr7:12564553 1.03E-103 dispersed
Mch7g0752 Mch-Chr7:12143320 Mch7g0794 Mch-Chr7:12564553 4.70E-79 dispersed
Mch7g0794 Mch-Chr7:12564553 Mch8g2974 Mch-Chr8:32422099 1.05E-72 dispersed
Mch5g0275 Mch-Chr5:1867047 Mch7g0794 Mch-Chr7:12564553 3.24E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0794 - - - 0.0