Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0857 ATGGCGGGCCTATCGCTCAAGTGCGGGGATTGTGGCGCGCTCTTGAGATCCGTGGAAGAAGCTCAAGAACACGCCGAACTCACTTCTCACTCCAACTTCTCCGAGTCCACTGAGGCCGTGCTCAATCTCGTCTGCGCTGCTTGCGGCAAGCCCTGCCGATCCAAGACGGAGAGTGATTTGCACACGAAAAGGACTGGCCATACCGAGTTTACTGATAAGACTTTGGAGGCTGCAAAACCAATAAGTTTGGAGGCCCCAAAGGTATCTGCGGAATCAGAAGATGCTGGTGATGAGAGTGCTAGCAAGTCTGAAGAAATGGTTGTGCCAGAGGTGGACAAGAATATATTAGGGGAACTTGAAGCTATGGGCTTCCCAACAGCACGAGCAACCCGTGCTCTTTTTTATTCTGGTAATGCCAGTCTTGAGGCTGCTGTAAATTGGGTAGTTGAACACGAGAATGATCCAGAGATAGATCAGATGCCTTTGGTTCCTAAGGACACTAAGGTTGAGGCTCAAAAGCCTTCTCTTACACCAGAGCAACTGAAAGCAAAACAGCAGGAGCTAAGGGAACGAGCTCGGAAGAAAAAAGAGGAGGAAGAGAAGATAGCAGAGAGAGAAAGGGAAAAGGAGAGAATTCGAATTGGCAAGGAGCTCTTAGAAGCAAAAAGAATTGAGGAAGAAAATGAGAGAAAAAGAATAATGGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAACGAGCCAGAGATAAAATTCGTCAAAAACTTGAAGAGGACAAGGCAGAAAGAAGACGGAGGCTTGGACTGCCGCCAGAAGATCCTTCGACTGCAAAACCTTCAGCACCTGTTGTTGAAGAGAAAAAGATCTCATTGCCTGTTAGACCTGCTTCAAAGGCAGAGCAAATGAGGGAATGTTTGCGATTGTTAAAGTCCAATCACAAGGAGGATGATGCTAAAGTGAAGAGAGCGTTTCAAACCCTTCTAACTTATGTGGGAAACGTGGCAAGAAGTCCTGATGAAGAGAAGTTCAGAAAAATCAGACTAAGCAACCAAACCTTCCAGGAAAGAGTGGGTGCACTGAGAGGGGGAATTGAGTTTTTAGAGCTGTGTGGGTTTGAGAAAATTGAAGGTGGTGAGTTCTTGTTTCTGCCCAGAGACAAGGTTGACAGGGCAGTTCTCAATTCTGCTGGCTCGGAGCTCGACTCCGCCATAAAGAATCCCTTCTTCGGCGTTCTCTAA 1236 46.93 MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLVCAACGKPCRSKTESDLHTKRTGHTEFTDKTLEAAKPISLEAPKVSAESEDAGDESASKSEEMVVPEVDKNILGELEAMGFPTARATRALFYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAQKPSLTPEQLKAKQQELRERARKKKEEEEKIAEREREKERIRIGKELLEAKRIEEENERKRIMALRKAEKEEEKRARDKIRQKLEEDKAERRRRLGLPPEDPSTAKPSAPVVEEKKISLPVRPASKAEQMRECLRLLKSNHKEDDAKVKRAFQTLLTYVGNVARSPDEEKFRKIRLSNQTFQERVGALRGGIEFLELCGFEKIEGGEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13138096 13146667 - MC07g0510 Mch7g0857 693195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0857 411 Gene3D - 112 157 - -
Mch7g0857 411 Gene3D - 303 401 - -
Mch7g0857 411 MobiDBLite consensus disorder prediction 169 208 - -
Mch7g0857 411 PANTHER F13M7.16 PROTEIN 1 411 - -
Mch7g0857 411 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Mch7g0857 411 MobiDBLite consensus disorder prediction 90 106 - -
Mch7g0857 411 MobiDBLite consensus disorder prediction 183 208 - -
Mch7g0857 411 Pfam PUB domain 318 389 IPR018997 -
Mch7g0857 411 SUPERFAMILY PUG domain-like 297 407 IPR036339 -
Mch7g0857 411 Pfam UBA-like domain 112 159 IPR015940 -
Mch7g0857 411 CDD UBA_PUB_plant 110 158 - -
Mch7g0857 411 CDD PUB_UBA_plant 305 411 - -
Mch7g0857 411 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
Mch7g0857 411 MobiDBLite consensus disorder prediction 53 106 - -
Mch7g0857 411 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 110 151 IPR015940 -
Mch7g0857 411 MobiDBLite consensus disorder prediction 237 270 - -
Mch7g0857 411 Coils Coil 181 261 - -
Mch7g0857 411 MobiDBLite consensus disorder prediction 237 284 - -
Mch7g0857 411 SMART uba_6 112 150 IPR015940 -
Mch7g0857 411 SUPERFAMILY UBA-like 95 164 IPR009060 GO:0005515(InterPro)
Mch7g0857 411 SMART PGNneu 321 384 - -
Mch7g0857 411 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0857 Mch-Chr7:13138096 Mch8g2681 Mch-Chr8:30085408 1.11E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0857 K24348 - csv:101215434 681.789