Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0866 ATGGCTGTGACAGCTTTGTTGTACCATTTGCTTTTTTGGGTTTTTGAATCTCTACCTTATTACTGGGAGTTATTTCTGCTCAGTGACAATGCTTGTATCCTAAATCAAAGGAATTGTGGAAAGATAATCTTGGTGACTGGAAGAGAAGGAAAAAAGGGAGAGGACTTTCTGGTTTTTCAAGACAAAGCTCTCTGTAAAGTTCAGTGGTTGATGGTAGAAGAGGAAAGGACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACAATGGCATCGACTTCTTTTCCTGGCGGGAAGCCATTGCCAGTGATTGAAACTTCTTCTAACTGTGTTCTGTACCCACCGCCACAAGCGACGTATGAGGATATCATAGGCAATCCCAAGATCTTCATGACATCCCTGGAAAAGCTCCATTCTATCATGGGAACCAAGTTCATGATCCCCATTATTGGAGGTAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTCACATCTCGTGGTGGCATTGAGAAGGTTATAAGGGAGAGAAGATGGAAAGAAGTAACATCGGTTTTCAACTTTCCTTCAACTGCAACGAATGCATCTTTTGTTCTGAGGAAGTATTATCTTTCTTTGCTTCATCATTTCGAGCAGATTCACTTCTTCAAAGCTGTGGGATGGACGCCAATGATTTCTGGCAAGTATTCTCCTCAGTGCCCGAGCCCAGCGCCGATCCCTACGCAAGGGACGCCCTCTATGTGGCCACCATCAGATAATCAGGCAGCCATGTCCCAGCAACCGCGGACTTCCACTACCGAACTTCCAGCAGTTGCACCAAGTTCGGCGTCAGCAGCAGGGTTTCCGGTGATTGGAGTCATTGATGGAAAATTTGATAGCGGGTATCTTGTTACTGTTACCATAGGATCGGAGAAGCTAAAAGGCGTGCTTTATCAGTCTCCTCCCGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGATGGTGTTTTTGCCAAAGATGGTGCTACCTCCATGGCACCAAATGCTCATCGCCGTCGTCGTAGGAAGAAATCCGAGATAAAACGAAGGGATCCCGCTCATCCAAAGCCGAACAGAAGCGGCTACAACTTTTTCTTTGCTGAGCAGCACGCTAGACTCAAACCATTATACCCAGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAGCTTTGGAATAAGCTTAATGAGTCAGACAGAACAGTTTATCAAGAGAAAGCCATGAAGGATAAAGAAAGATATCGAATCGAGATGGAGGATTACCGAGAGAAGCTGAGGACGGGCCAGGTCATCAGTGATGCCGTGCCATTACAACAGCGTCTTCCTGAGCCAGACCTGAACATGGTCTATGCTGACAAAAATGAAGAAACTGAGGGTGGCGAATCTCCTCAAACCCCGGATCATGATACTAGTTACGTCGAAGGCGACTCCGGAGAATATAAAACTGAGGAGAAGGAGGAGGATGAGGAAGAGGATTCGGAAGAAGATGCATCTCCACAAAGGGTTGGCAATGTAGATGTTAACGTTTTGGTCGAGGAGGAAGGCGGCGGCGAGACGAGAGCTGCAGAAGAGGATGTTAGAAAAGAGAGTAGTACAGTGGTGGTCGGCGACGAGAAAGAAGTTTTCACCAGAGATTCGTTAATGGAGGAGGCAAAGGAAGAACCAGAACCACCACCACCACCACCAACAACAGCCATTAGAGAAGATTAA 1725 46.78 MAVTALLYHLLFWVFESLPYYWELFLLSDNACILNQRNCGKIILVTGREGKKGEDFLVFQDKALCKVQWLMVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISGKYSPQCPSPAPIPTQGTPSMWPPSDNQAAMSQQPRTSTTELPAVAPSSASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEKEEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLMEEAKEEPEPPPPPPTTAIRED 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13202443 13207131 - MC07g0519 Mch7g0866 693204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0866 574 MobiDBLite consensus disorder prediction 460 574 - -
Mch7g0866 574 SMART bright_3 124 215 IPR001606 GO:0003677(InterPro)
Mch7g0866 574 MobiDBLite consensus disorder prediction 521 561 - -
Mch7g0866 574 MobiDBLite consensus disorder prediction 245 267 - -
Mch7g0866 574 SUPERFAMILY HMG-box 353 432 IPR036910 -
Mch7g0866 574 ProSiteProfiles ARID domain profile. 123 214 IPR001606 GO:0003677(InterPro)
Mch7g0866 574 Coils Coil 409 429 - -
Mch7g0866 574 Pfam ARID/BRIGHT DNA binding domain 126 210 IPR001606 GO:0003677(InterPro)
Mch7g0866 574 MobiDBLite consensus disorder prediction 340 354 - -
Mch7g0866 574 CDD HMG-box_AtHMGB9-like 360 426 - -
Mch7g0866 574 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 99 476 - -
Mch7g0866 574 SMART hmgende2 359 428 IPR009071 -
Mch7g0866 574 CDD ARID_HMGB9-like 125 210 IPR045303 GO:0003677(InterPro)
Mch7g0866 574 MobiDBLite consensus disorder prediction 331 367 - -
Mch7g0866 574 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 360 427 IPR009071 -
Mch7g0866 574 Gene3D - 120 217 IPR036431 GO:0003677(InterPro)
Mch7g0866 574 MobiDBLite consensus disorder prediction 486 501 - -
Mch7g0866 574 SMART ARID_2 120 210 - -
Mch7g0866 574 FunFam High mobility group B protein 15 342 437 - -
Mch7g0866 574 SUPERFAMILY ARID-like 124 224 IPR036431 GO:0003677(InterPro)
Mch7g0866 574 MobiDBLite consensus disorder prediction 231 267 - -
Mch7g0866 574 Gene3D High mobility group box domain 344 439 IPR036910 -
Mch7g0866 574 FunFam High mobility group B protein 15 117 228 - -
Mch7g0866 574 Pfam HMG (high mobility group) box 360 427 IPR009071 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0083 Mch-Chr11:538856 Mch7g0866 Mch-Chr7:13202443 3.75E-88 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43716 PF01388 ARID 2.50E-17 CL0123 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0866 - - - 0.0