Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0872 ATGCTTACCATTGCTGCCCACTGGCACAATTTACTCCCTCCCCTTTATTTCACTGGCTCACTCCCATTATGTAGCCCACAGCTTCCCATTCCGCTCCTTGCTTCTTCTTCACCATCGTTTCTCTGCCGTCTGTGGCCAAATACCCAAATGGGTGGTGACGGAAAGATCTTCACCTTGGCGGAAGTTTCTCAGCACAACACCCCCAAGGACTGTTGGTTGATCATCAATGGCAAGGTTTATAATGTAACCGAGTTCTTGGAGGACCATCCCGGTGGCGACGAGGTCCTATTGTCAGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGATAGTGCAAGAGAAACAATGAACAAATACTATGTTGGGGAGATCGATATCTCAACGATCCCGGAAAAGATGACATACTCAGCTACAAAGCAGCCTCACTACAATCAGGATAAGACGACCGAGTTCATCGTCAAGCTCCTCCAGTTCCTCGTCCCTCTCGCAATCTTGGGTTTGGCAGTCGGTATCCGCTTTTACACCAAATCAACCTGA 552 48.19 MLTIAAHWHNLLPPLYFTGSLPLCSPQLPIPLLASSSPSFLCRLWPNTQMGGDGKIFTLAEVSQHNTPKDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSDSARETMNKYYVGEIDISTIPEKMTYSATKQPHYNQDKTTEFIVKLLQFLVPLAILGLAVGIRFYTKST 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13249802 13253293 + MC07g0523 Mch7g0872 693210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0872 183 SMART Cyt_b5_2 57 130 IPR001199 -
Mch7g0872 183 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 54 135 IPR036400 -
Mch7g0872 183 PRINTS Cytochrome B5 signature 79 89 IPR001199 -
Mch7g0872 183 PRINTS Cytochrome B5 signature 104 111 IPR001199 -
Mch7g0872 183 PRINTS Cytochrome B5 signature 89 103 IPR001199 -
Mch7g0872 183 PRINTS Cytochrome B5 signature 117 129 IPR001199 -
Mch7g0872 183 Pfam Cytochrome b5-like Heme/Steroid binding domain 58 129 IPR001199 -
Mch7g0872 183 FunFam Cytochrome b5 type B 52 134 - -
Mch7g0872 183 Gene3D - 49 134 IPR036400 -
Mch7g0872 183 PANTHER CYTOCHROME B5 53 176 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Mch7g0872 183 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 54 130 IPR001199 -
Mch7g0872 183 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 85 92 IPR018506 GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0510 Mch-Chr5:3382257 Mch7g0872 Mch-Chr7:13249802 1.86E-41 dispersed
Mch6g1825 Mch-Chr6:20818771 Mch7g0872 Mch-Chr7:13249802 2.31E-63 dispersed
Mch7g0872 Mch-Chr7:13249802 Mch8g0144 Mch-Chr8:897967 3.65E-34 dispersed
Mch7g0629 Mch-Chr7:10884682 Mch7g0872 Mch-Chr7:13249802 1.22E-13 transposed
Mch5g0194 Mch-Chr5:1248593 Mch7g0872 Mch-Chr7:13249802 1.10E-75 wgd
Mch6g2268 Mch-Chr6:24772305 Mch7g0872 Mch-Chr7:13249802 3.42E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0872 K23490 - csv:101213506 256.914