Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0891 AACTGCTCGGCCACTCTGGCGGAGCTGCTGGGCCCGAACGTGACGAACTCCGCCGCCGCCGCCGCCTTCATCTGCGACGCCGCCGCCAACAACCTCTCCGACACCCGCTTTGCTGTCGACACCCTCTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCTATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGCACCCCCTCCAACGGCTTCATCGGCCACCACTTCTTCGGCCTCAAATCCGTCCCCTCCTCCGCCGCCGATTTCAGCTTCTTCCTCTACCAGTGGGCTTTCGCCATCGCCGCCGCCGGAATCACCAGCGGCTCCATCGCCGAGCGGACCCAATTCGTCGCCTATTTGATCTACTCCTCTGTTTTGACCGGCTTTGTTTACCCGGTTGTGTCCCACTGGTTCTGGTCCCCCGACGGTTGGGCCAGCCCGGCCCGGCCCGGTGGGGACTTTTTATTCGGGACCGGCGTCATTGATTTTGCCGGTTCTGGAGTCGTTCATATGGTTGGTGGTATTGCCGGACTTTGGGGCGCAGTCATTGAAGGCCCCAGAATTGGCCGCTTCGACCGGTCCGGCCGATCCGTTGCGCTCCGTGGACATAGCGCGACGCTCGTGGTTCTTGGGACGTTCATGCTTTGGTTTGGTTGGTACGGGTTCAACCCCGGTTCGTTCACGAAAATACTCGTCACTTACCCGAATGGTTCGGGTGGGTTTTACGGACAGTGGAGCGCGGTCGGGCGGACCGCCGTGACGACCACGCTCGCCGGCTGCACGGCGGCGCTCACGACGCTGTTCGGAAAGCGGATTCTCTCCGGTCATTGGAACGTCACCGACGTCTGCAACGGGTTGCTCGGCGGCTTCGCCGCCATAACGTCCGGCTGCTCGGTGGTGGAGCCGTGGGCGGCGGTGGTGTGTGGGTTTGTGGCGGCGGTGGTGTTGATTAGCTGTAACAAACTGGCGGAGAAGGTGAAATTCGACGACCCATTGGAGGCGGCGCAACTGCACGGCGGGTGCGGCGCGTGGGGGATAATTTTCACGGCGTTGTTTGCGACGGAGAAGTATGTGAACGAAGTGTATCCGGGAAAGCCGGGGCGGCCGCACGGGCTGTTCATGGGCGGCGGAGGGAGGCTGCTGGCGGCGCACGTGATTCAGATTTTGGTGATTATTGGGTGGGTGAGCGCCACCATGGGGCCGCTGTTCTTCATTCTTCATAAGCTGAAGCTTTTGCGAATCTCGCCGGAAGATGAGATGGCCGGCATGGATATGACGCGGCACGGCGGATTTGCTTACGTGTACCATGATGAAGATGATTCCAATAAGAATGGAGTTCAGATGAGGAAAATTGAGCCCAACTCAACAAGTCCA 1476 60.84 NCSATLAELLGPNVTNSAAAAAFICDAAANNLSDTRFAVDTLYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGHHFFGLKSVPSSAADFSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPARPGGDFLFGTGVIDFAGSGVVHMVGGIAGLWGAVIEGPRIGRFDRSGRSVALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILVTYPNGSGGFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVVCGFVAAVVLISCNKLAEKVKFDDPLEAAQLHGGCGAWGIIFTALFATEKYVNEVYPGKPGRPHGLFMGGGGRLLAAHVIQILVIIGWVSATMGPLFFILHKLKLLRISPEDEMAGMDMTRHGGFAYVYHDEDDSNKNGVQMRKIEPNSTSP 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13469856 13471331 + MC07g0539 Mch7g0891 693229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0891 492 FunFam Ammonium transporter 21 482 - -
Mch7g0891 492 SUPERFAMILY Ammonium transporter 39 448 - -
Mch7g0891 492 PANTHER AMMONIUM TRANSPORTER 29 475 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Mch7g0891 492 Gene3D Ammonium transporter AmtB like domains 16 486 IPR029020 -
Mch7g0891 492 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Mch7g0891 492 Pfam Ammonium Transporter Family 44 467 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Mch7g0891 492 NCBIfam ammonium transporter 40 467 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0143 Mch-Chr5:943775 Mch7g0891 Mch-Chr7:13469856 6.55E-299 dispersed
Mch7g0891 Mch-Chr7:13469856 Mch8g2525 Mch-Chr8:28233111 2.25E-249 dispersed
Mch6g2311 Mch-Chr6:25075392 Mch7g0891 Mch-Chr7:13469856 6.37E-263 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0891 K03320 - csv:101212168 862.062