Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g0920 | ATGGCCGGTGAGGTAGCGGTGGAAGGTGCTGCGGCTGCGGCGGCGGCGGCGGAAGTAGCTGATTCGAATCAGCAGTCCCACAGATTGGAGAGGAAGTGGACCTTTTGGTTCGATAACCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTCGACACCGTCGAAGAATTCTGGTGTTTGTACGATCAGATATTCAAGCCGAGCAAGCTGCCGGCTAATGCAGATTTCCATTTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACAAGCAGTAGAAAGGCTAACCTTGATAACATGTGGCTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCTAGTGTGCGCCAGAGGCAGGACAAACTTGCATTGTGGACCAAGACAGCCACAAATGAGGCTGCCCAGATGAGCATCGGAAGGAAGTGGAAGGAAATAATCGACGTCACTGACAAGATTACCTACAGCTTTCATGAGGACTTGAGAAGGGAAAAGTCAGCAAAATCCCGATACAATGTCTGA | 609 | 50.25 | MAGEVAVEGAAAAAAAAEVADSNQQSHRLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKITYSFHEDLRREKSAKSRYNV | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 13693202 | 13699452 | + | MC07g0565 | Mch7g0920 | 693258 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g0920 | 202 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 83 | 106 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
| Mch7g0920 | 202 | SUPERFAMILY | eIF4e-like | 23 | 195 | IPR023398 | - | |
| Mch7g0920 | 202 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 17 | 202 | IPR023398 | - | |
| Mch7g0920 | 202 | Pfam | Eukaryotic initiation factor 4E | 29 | 183 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
| Mch7g0920 | 202 | Coils | Coil | 12 | 32 | - | - | |
| Mch7g0920 | 202 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 17 | 196 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
| Mch7g0920 | 202 | FunFam | Eukaryotic translation initiation factor 4E | 18 | 202 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g1035 | Mch-Chr3:14005537 | Mch7g0920 | Mch-Chr7:13693202 | 1.29E-76 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch7g0920 | K03259 | - | csv:101208495 | 377.867 |