Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0950 ATGACGGATTACGACGGGAGAAACGAAGGTAATGGAGAAGACGCCGACCATTATGGCGATGGTTTTTCTCCCCAAGCTCGTGGCGGCAGCCATGGTGGCCACGATTCTCACAGCGATTCAAAACCTCATGTCTTTTCATGCAATGGGAGAGATACATCAAGAGCACCAACCAGTGAAGAGGCACCCTCAAATGTCACCAAGCAGAAGGTTGCAGCCGCCAAACAGTATAATGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAATTTGGCCGATGCTGAGGTCTCTCAAGAAGAGCAAAGTAACCTGCTTAAGCATCTAGAGAAGAAGGAAACGGAATATATGCATCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGATGGGTGCTTTTGGAGAGGAAAAAAAGTCGCATAAAAGTCTGGAAACTGCAGCTTCAGCTCCCTTTTATACCCCTAACACTGTCAGACTCGGTGTTAGACGCCATGTACTAGAAAAGAAGTTGGCCGATGCTGAGGTCTATCAAGAAGAGCAAAATAACCTGCTTAAGCATCTAGAGAAGAAGGAAACGGAATATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTGTGTAGGGAGAAAGCAACTGGTCATGTATATGTCATGAAGAAGCTCAAAAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCTGAAAGGAACCTATTGGCAGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAATATTTGTATCTTATTATGGAATACTTACCTGGGGGAGACATGATGACTTTATTGATGAGGAAAGATATTCTAACAGAAGACGAGGCCCGATTTTATGTTGGCGAGACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCTGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTCTCCCAGGGAAATAACCTTAGTGGAGCTCTTCAAAGTGATGGGCGCCCTGTGCCATCAAAACGCACACAACAGGAACAACTACAGCATTGGCAAAGGAACAGGAGGATGCTTGTAAGTAGTTCAATATCATGTATGATGGATCCGTAA 1293 42.61 MTDYDGRNEGNGEDADHYGDGFSPQARGGSHGGHDSHSDSKPHVFSCNGRDTSRAPTSEEAPSNVTKQKVAAAKQYNENHYKKQMKSLEERRERRHVLEKNLADAEVSQEEQSNLLKHLEKKETEYMHLQRHKMGADDFEPLTMIGMGAFGEEKKSHKSLETAASAPFYTPNTVRLGVRRHVLEKKLADAEVYQEEQNNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYVMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGNNLSGALQSDGRPVPSKRTQQEQLQHWQRNRRMLVSSSISCMMDP 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13925856 13931870 - MC07g_new0359 Mch7g0950 693288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0950 430 MobiDBLite consensus disorder prediction 42 73 - -
Mch7g0950 430 Gene3D Phosphorylase Kinase; domain 1 78 154 - -
Mch7g0950 430 Coils Coil 187 210 - -
Mch7g0950 430 Gene3D Transferase(Phosphotransferase) domain 1 308 379 - -
Mch7g0950 430 SUPERFAMILY Protein kinase-like (PK-like) 205 373 IPR011009 -
Mch7g0950 430 MobiDBLite consensus disorder prediction 1 16 - -
Mch7g0950 430 SMART serkin_6 224 427 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0950 430 CDD MobB_NDR_LATS-like 179 219 - -
Mch7g0950 430 FunFam Non-specific serine/threonine protein kinase 195 307 - -
Mch7g0950 430 Coils Coil 88 122 - -
Mch7g0950 430 MobiDBLite consensus disorder prediction 385 412 - -
Mch7g0950 430 CDD MobB_NDR_LATS-like 73 134 - -
Mch7g0950 430 Pfam Protein kinase domain 226 375 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0950 430 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524(InterPro)
Mch7g0950 430 FunFam Non-specific serine/threonine protein kinase 308 375 - -
Mch7g0950 430 Gene3D Phosphorylase Kinase; domain 1 195 307 - -
Mch7g0950 430 MobiDBLite consensus disorder prediction 1 80 - -
Mch7g0950 430 PANTHER SERINE/THREONINE-PROTEIN KINASE 60 152 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch7g0950 430 ProSiteProfiles Protein kinase domain profile. 224 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0950 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0950 Mch-Chr7:13925856 Mch9g0976 Mch-Chr9:8135716 1.42E-140 dispersed
Mch7g0950 Mch-Chr7:13925856 Mch7g0952 Mch-Chr7:13933984 1.32E-178 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77552 PF00069 Pkinase 7.20E-42 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0950 K08790 - csv:101205120 477.248