Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0952 ATGGAGGCTACTAGGCGTTGGTTTAATAAGTTCAGATCGAAAGACAAGCCAAAGTCCTCAACAAATAAGGAGAGTACAGGCAATGCGAGAGATGCATCAAGAGCACCAACCAGTGAAGAGGTACCCTCAAATGTCACCAAGCAGAAGGTTGCAGCCGCCAAACAGTATATTGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAAGTTGGCCGATGCTGAGGTCTCTCAAGAAGAGCAAAGTAACCTGCTTAAGCATCTAGAGAAGAAGGAAACAGAATATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTGTGTAGGGAGAAAGCAACTGGTCATGTATATGCCATGAAGAAGCTCAAAAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCTGAAAGGAACCTATTGGCAGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAATATTTGTATCTTATTATGGAATACTTACCTGGGGGAGACATGATGACTTTATTGATGAGGAAAGATACTCTAACAGAAGACGAGGCCCGATTTTATGTCGGCGAGACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCTGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTCTCCCAGGGAAATAACCTTAGTGGAGCTCTTCAAAGTGATGGGCGCCCTGTGCCATCAAAACGCACACAACAGGAACAACTACAGCATTGGCAAAGGAACAGGAGGATGCTTGCTTATTCTACTGTTGGAACTCCAGATTATATTGCTCCAGAAGTTTTGCTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTTGTGGGATATCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGTAGGAAGATAGTTAATTGGAGAACTCACTTGAAATTTCCAGAAGAAGCAAAACTCTCTCCAGAAGCGAAGGATTTAATTAGTAAACTCTTGTGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCGCACCCATGGTTCAAGGGCATTGAGTGGGACAAGTTGTACCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACCAAATCCAGACATCGTCAAAATCAGGTCCATGGAGAAAGATGCTGTCATCGAAGGATATCAATTTTGTGGGCTATACGTACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAATTAAAGAAGAAGAGTGCGAAATCTAAAAGACCTTCCATCAAATCTCTTTTTGATAACGAATCTGCAATGGCGACCAATCAACCCGTTCAAGGTAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTCCCCGAGAAACCGATGAGCGCCAACGAAAAGTGTTCATGA 1659 41.23 MEATRRWFNKFRSKDKPKSSTNKESTGNARDASRAPTSEEVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGNNLSGALQSDGRPVPSKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKSAKSKRPSIKSLFDNESAMATNQPVQGSFLKLLPPQLEVPEKPMSANEKCS 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13933984 13941793 - MC07g_new0361 Mch7g0952 693290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0952 552 CDD STKc_NDR_like 117 482 - -
Mch7g0952 552 SMART serkin_6 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 Pfam Protein kinase domain 121 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Mch7g0952 552 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Mch7g0952 552 MobiDBLite consensus disorder prediction 1 21 - -
Mch7g0952 552 Coils Coil 68 102 - -
Mch7g0952 552 MobiDBLite consensus disorder prediction 22 48 - -
Mch7g0952 552 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524(InterPro)
Mch7g0952 552 CDD MobB_NDR_LATS-like 53 114 - -
Mch7g0952 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 MobiDBLite consensus disorder prediction 1 48 - -
Mch7g0952 552 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 SMART pkinase_C_6 419 483 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Mch7g0952 552 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Mch7g0952 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 485 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch7g0952 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g0952 552 SUPERFAMILY Protein kinase-like (PK-like) 94 471 IPR011009 -
Mch7g0952 552 Gene3D Phosphorylase Kinase; domain 1 108 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0433 Mch-Chr11:2716606 Mch7g0952 Mch-Chr7:13933984 6.16E-229 dispersed
Mch1g2120 Mch-Chr1:20448907 Mch7g0952 Mch-Chr7:13933984 1.16E-276 dispersed
Mch6g0941 Mch-Chr6:6647365 Mch7g0952 Mch-Chr7:13933984 3.35E-229 dispersed
Mch6g2545 Mch-Chr6:27350844 Mch7g0952 Mch-Chr7:13933984 4.78E-71 dispersed
Mch7g0952 Mch-Chr7:13933984 Mch9g0976 Mch-Chr9:8135716 0.00E+00 dispersed
Mch7g0950 Mch-Chr7:13925856 Mch7g0952 Mch-Chr7:13933984 1.32E-178 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77553 PF00069 Pkinase 4.70E-66 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0952 K08790 - csv:101205120 1087.4