Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g0967 ATGGATTCTCCATACTTTCACTCCCAAAATTCCGATTTCTCGCCGGAATCTTCCTTCGGCTCCTTCGATTCATTCCGATGGGACAGATTCGGATCAAACGACAACTCTCTGCCCTTCGACAAGAGTGATTCCGGCGAAATGCTCCTCCACAGCCTGATCTCCGGAGCCGCCGAGTACCCGCCTGAGGAAACCCTCCGGCAGACGCCGATCAAGGAGGAGGAGGTCGATTCGCCCGGAGAAGAAGAGCCCCACAAGCCAAAATCGTACAGGGGCGTCCGCCGGCGGCCGTGGGGGAAATTCGCGGCGGAGATTAGGGACTCGACGAGGCACGGGATTCGGGTTTGGCTCGGGACCTTCGACAGCGCCGAGGCGGCGGCTTTGGCTTACGATCAAGCGGCTTTCTCGATGCGGGGCTCCGCCGCGGTTCTGAATTTTCCGGTGGAGAGAGTTCAGGAGTCGTTGAAAGAGATGGAGATGATCGACGCCGCCGCCGACGGCGATGGCGGATCTCCGGTGGTGGCCCTGAAGAGAAAACACTCGATGAGGAAGAAATTCACGAGAAGAAAGAGCAAAGAGAGAGATGGGATTGGGAAAATGGAGAATAATGTGGTGGTGTTGGAAGATCTTGGCCCCGATTTTTTGGAAGAACTTTTGGAGTCGTCGGAGAATCTCCGGCCATGG 681 56.68 MDSPYFHSQNSDFSPESSFGSFDSFRWDRFGSNDNSLPFDKSDSGEMLLHSLISGAAEYPPEETLRQTPIKEEEVDSPGEEEPHKPKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMIDAAADGDGGSPVVALKRKHSMRKKFTRRKSKERDGIGKMENNVVVLEDLGPDFLEELLESSENLRPW 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14046891 14047571 - MC07g0600 Mch7g0967 693305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g0967 227 CDD AP2 87 147 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 SMART rav1_2 88 152 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 Pfam AP2 domain 88 139 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 FunFam Ethylene-responsive transcription factor 2 87 148 - -
Mch7g0967 227 PRINTS Ethylene responsive element binding protein signature 128 148 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 MobiDBLite consensus disorder prediction 65 88 - -
Mch7g0967 227 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677(InterPro)
Mch7g0967 227 MobiDBLite consensus disorder prediction 53 91 - -
Mch7g0967 227 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch7g0967 227 PANTHER DNA-BINDING DOMAIN 46 183 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0091 Mch-Chr5:590752 Mch7g0967 Mch-Chr7:14046891 3.88E-74 dispersed
Mch6g2645 Mch-Chr6:28174377 Mch7g0967 Mch-Chr7:14046891 7.89E-26 dispersed
Mch7g0967 Mch-Chr7:14046891 Mch9g0942 Mch-Chr9:7684745 1.34E-47 dispersed
Mch7g0967 Mch-Chr7:14046891 Mch7g0968 Mch-Chr7:14063218 1.96E-27 tandem
Mch5g0089 Mch-Chr5:574484 Mch7g0967 Mch-Chr7:14046891 1.70E-25 wgd
Mch6g2033 Mch-Chr6:22642161 Mch7g0967 Mch-Chr7:14046891 2.78E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43723 PF00847 AP2 8.30E-15 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g0967 K14516 - csv:101206564 350.132