Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g1013 | ATGGCTCGGGACGGGCATGTGGTGCCGGTGGATCCACAGACGGCGCTGACTGTCAAGAAGAAGAAACAATCTTCTCGGAATTGGATTCTCCTGGATTGTACGGGCCAGGGGACCGTCCTCGATGTCGACAAGTATGCTATTATGCATCGAGTTCAAATTCACGCTCGAGACCTTCGGATTCTCGACCCCTTGCTTTCTTACCCCTCCACCATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTTCTGAAGAGGTTTTGCTTAGAGACCCAACGGATGAAAATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGACTGCCTCCTTCTAATGCTTTCCAGCTTCAGATTCAAGGAGATGGGAAAGAGTATCAGGGGGGGCAACATGATGGTGAAGCTGAAGAAGATGAATCGCCATTTGAATTCCGTGCTCTTGAGGTAGCTTTGGAAGCTATATGTAGTTTTCTTGCTGCCCGGACAACTGAACTGGAGACTGCTGCTTATCCTGCATTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCAAGGGTTCAAAAGGTGAGGGATGAGCTTGAACAATTACTAGACGATGACGATGATATGGCAGACCTTTATTTGTCAAGAAAGATGGTCAGTTCATCTCCTGTAAGCGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACTATTGGTTCAAAGATCTCAAGAGCCAGTAGAGCAAGTATTGCAACCGTACGTGGGGATGAGAATGACATCGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGTACCTTGAACAAATTAACTACACTGAGAGAATATATTGATGACACAGAAGATTACATCAACATTCAGCTTGACAATCATCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGGGTGCAATATTTGGCATGAACATTCCATACACTTGGAACGACGACCACGGATACATGTTTAAATGGGTTGTCATTGTTACTGGAGTAGCTTGTGCGGTGATGTTCATTGCAATTATTTACTATGCCCGCTACAAAGGTTTGGTGGGGTCTTGA | 1182 | 45.26 | MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITSEEVLLRDPTDENVIPVVEELQRRLPPSNAFQLQIQGDGKEYQGGQHDGEAEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMVSSSPVSGSGPANWFPASPTIGSKISRASRASIATVRGDENDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWNDDHGYMFKWVVIVTGVACAVMFIAIIYYARYKGLVGS | 393 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 14312521 | 14324868 | - | MC07g0640 | Mch7g1013 | 693351 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g1013 | 393 | Coils | Coil | 194 | 221 | - | - | |
| Mch7g1013 | 393 | CDD | Mrs2_Mfm1p-like | 28 | 390 | IPR039204 | - | |
| Mch7g1013 | 393 | Pfam | Magnesium transporter MRS2-like | 40 | 234 | - | - | |
| Mch7g1013 | 393 | Pfam | Magnesium transporter MRS2-like | 273 | 320 | - | - | |
| Mch7g1013 | 393 | Gene3D | - | 14 | 99 | - | - | |
| Mch7g1013 | 393 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 329 | 381 | IPR045863 | - | |
| Mch7g1013 | 393 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 13 | 390 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Mch7g1013 | 393 | FunFam | Magnesium transporter MRS2-1 | 16 | 99 | - | - | |
| Mch7g1013 | 393 | Gene3D | Magnesium transport protein CorA, transmembrane region | 104 | 323 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0557 | Mch-Chr10:3662533 | Mch7g1013 | Mch-Chr7:14312521 | 9.88E-97 | transposed | |
| Mch4g0797 | Mch-Chr4:5514716 | Mch7g1013 | Mch-Chr7:14312521 | 5.48E-91 | transposed | |
| Mch8g0141 | Mch-Chr8:881381 | Mch7g1013 | Mch-Chr7:14312521 | 2.90E-85 | transposed | |
| Mch8g1060 | Mch-Chr8:7453566 | Mch7g1013 | Mch-Chr7:14312521 | 5.10E-107 | transposed | |
| Mch6g1995 | Mch-Chr6:22361998 | Mch7g1013 | Mch-Chr7:14312521 | 1.04E-190 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch7g1013 | K16075 | - | csv:101203841 | 688.337 |