Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1076 ATGCTGTCGAATCAACTGCAAAATGGGATAGACAGAGCAAAGATCATGTGGTCTCGCCTCCCGAACGCCGAGGAAAATGAGGACGACCATGTCAGCTTCTTGAAGAAGACCGATGGGGGTGGCGTCGAGAGCCTTGATTACGAGGTCATCGAGAATTATGCGTACTGGGATGAGCAGGCGCAAAGAGGGAAGCTATTTGTTGGGTACAGTGTGGCAGTTAAGTGGCTGTATGCTTTGCTCATTGGCATTGGCACAGGATTGGCTGCAGTTTTCATAAATATGGCTGTTGAGAACTTTGCTGGCTGGAAATTTTCGTTGACATTTGCTCTAATTCAAAAGTCATATGTGGCTGGTTTTATAGTATACTTAGCAATCAACTTGGTTCTAGTATTTTCATCTGTGTTTATCGTCACAAACTTTGCTCCTGCAGCAGCTGGATCTGGCATCCCTGAAATCAAGGGTTATTTGAATGGAATTGACATTCACGGTGTCCTTTTCTTCAGAACCTTGATTGGAAAGATTTTTGGAAGCATTGGTTCAGTGGGAGGTGGATTGGCTTTAGGCAAAGAAGGGCCTCTTGTACATACTGGTGCTTGTATTGCTTCTTTGCTAGGACAAGGTGGATCTGCTAAATATCATCTAAATTCCAGGTGGTTACAAGTGTTCAAGAGTGATCGGGATCGCCGAGATCTTGTGACCTGTGGGTGCGCGGCAGGAGTTGCTGCTGCTTTTAGAGCTCCTGTTGGTGGTGTACTATTTGCTTTGGAAGAAGTAACGTCTTGGTGGAAGAGTCAACTTTTGTGGCGTGTGTTCTTTACTTCTGCTGTGGTGGCTGTTGTGGTGCGTGCAGCTATGGGATGGTGTAAGAGTGGGAAGTGTGGACATTTTGGTGCTGGGGGTTTCATAATATGGGACATATCAGATGGCCAAGAGGACTACTCTTTTGGGGAGTTGTTGCCTATGACTGTGATTGGGGTTATTGGAGGCTTATTAGGAGCATTATTTAACCAGCTTACTCTTTACATGACTTATTGGCGACGAAATCATTTGCACAAGAAGGGGAACCGAGTCATGATCATCGAGGCTTGTCTCATCTCACTACTAACATCAATTATTTCCTTCGGACTACCACTTCTAAGGCAATGTACTCCATGCCCCAAACCTGATCCTGAATTGGGCAATGAATGCCCAAGGCCTCCTGGGATGTATGGGAATTATGTTAATTTTTACTGCAGCAAGGACAATGAATACAATGACCTTGCAACCATTTTCTTCAACACCCAGGATGATGCCATAAGGAATTTGTTCAGTGCAAAAACAATGCATGAATTCAGTGCACAGAGTTTATTGACCTTTCTGGTTATGTTTTATACCTTAGCTGTTGTGACATTTGGTACTGCTGTTCCTGCTGGTCAATTTGTTCCTGGTATAATGATTGGGTCTACCTATGGACGTTTAGTTGGGAAGTTTGTGGTTAATTTCTACAAGAAACCCAACATTGAAGAGGGAACATATGCTTTGTTGGGCGCTGCATCTTTTCTAGGAGGTTCTATGCGAATGACAGTGTCTCTGTGTGTCATCATGGTTGAAATTTCAAACAACTTGAAATTTTTACCCCTCATCATGCTTGTCCTTCTGATTTCCAAGGCTGTTGGTGATGCCTTTAATGAAGGCCTATATGAAGAGCAGGCTCAATTGAAGGGTATTCCATTACTGGAATCAAGACCAAAGTACCAGATGCGGAAAATTACAGCAAAGGAGGCCTGTGGAAAAAGGGTTGTCTCCTTCCCCCGTGTTGTTAAGGTTGCTGATGTTGTTTCTATTTTGCGGAGCAACAGACATAATGGCTTTCCTGTGATTGATTACTCTCGGAATGGCGAAACACGTGTCATCGGACTAATGCTTCGAAGTTATTTGTTAGGACTTTTACAGTCTAAAGTAGATTTTCAGCACAGTCCCTTGCCTTCGGATCCAAGAGGATCCATACCAAGCAGGCACAATTTTAGTGAATTTGTGAAACCCGCTTCCAGTAAAGGAATTTCTATTGATGATATACACATCAGTTCAGAGGACATGGAAATGTACATCGATCTACTCCCATATCTGAATCCATCTCCATATATTGTCCCAGAAGACATGTCTTTGACAAAGGTATATAATCTTTTCCGGCAACTAGGTCTGAGACATGCATTCGTCGTTCCCCGTCCATCAAATGTGGTCGGTTTGATAACTCGAAAGGATTTGTTGATAGAGGATGGCGAAGATTCGGATGCAATGGAACTACAATCGACTAGTGTAAGAGCTCGGCGTCCAGATAGAAGAATAGTTACAAGGAATGGGGATGTGGAGAGGCCTCTTCTGAACGGACTTCTGGTCAATAACTAA 2385 43.56 MLSNQLQNGIDRAKIMWSRLPNAEENEDDHVSFLKKTDGGGVESLDYEVIENYAYWDEQAQRGKLFVGYSVAVKWLYALLIGIGTGLAAVFINMAVENFAGWKFSLTFALIQKSYVAGFIVYLAINLVLVFSSVFIVTNFAPAAAGSGIPEIKGYLNGIDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSAKYHLNSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWKSQLLWRVFFTSAVVAVVVRAAMGWCKSGKCGHFGAGGFIIWDISDGQEDYSFGELLPMTVIGVIGGLLGALFNQLTLYMTYWRRNHLHKKGNRVMIIEACLISLLTSIISFGLPLLRQCTPCPKPDPELGNECPRPPGMYGNYVNFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTMHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGKFVVNFYKKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEISNNLKFLPLIMLVLLISKAVGDAFNEGLYEEQAQLKGIPLLESRPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILRSNRHNGFPVIDYSRNGETRVIGLMLRSYLLGLLQSKVDFQHSPLPSDPRGSIPSRHNFSEFVKPASSKGISIDDIHISSEDMEMYIDLLPYLNPSPYIVPEDMSLTKVYNLFRQLGLRHAFVVPRPSNVVGLITRKDLLIEDGEDSDAMELQSTSVRARRPDRRIVTRNGDVERPLLNGLLVNN 794
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 14813751 14821692 - MC07g0697 Mch7g1076 693414
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1076 794 Gene3D - 574 755 IPR046342 -
Mch7g1076 794 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 27 755 IPR051280 GO:0015108(PANTHER)|GO:0043231(PANTHER)
Mch7g1076 794 ProSiteProfiles CBS domain profile. 702 758 IPR000644 -
Mch7g1076 794 SMART cbs_1 592 644 IPR000644 -
Mch7g1076 794 SMART cbs_1 705 753 IPR000644 -
Mch7g1076 794 FunFam Chloride channel protein 660 751 - -
Mch7g1076 794 SUPERFAMILY CBS-domain pair 577 749 IPR046342 -
Mch7g1076 794 CDD CBS_pair_voltage-gated_CLC_euk_bac 593 749 - -
Mch7g1076 794 Pfam Voltage gated chloride channel 131 552 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Plant CLC chloride channel signature 48 56 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Mch7g1076 794 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Mch7g1076 794 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Mch7g1076 794 PRINTS Plant CLC chloride channel signature 420 436 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Mch7g1076 794 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Mch7g1076 794 Pfam CBS domain 703 749 IPR000644 -
Mch7g1076 794 ProSiteProfiles CBS domain profile. 589 649 IPR000644 -
Mch7g1076 794 CDD ClC_6_like 43 572 - -
Mch7g1076 794 FunFam Chloride channel ClC3 66 383 - -
Mch7g1076 794 SUPERFAMILY Clc chloride channel 52 574 IPR014743 -
Mch7g1076 794 Gene3D Clc chloride channel 69 573 - -
Mch7g1076 794 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 468 488 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 503 519 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 559 573 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch7g1076 794 PRINTS Chloride channel signature 521 540 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g1076 Mch-Chr7:14813751 Mch8g3054 Mch-Chr8:33032242 7.17E-204 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1076 K05016 - csv:101215989 1466.83