Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1086 ATGCAAGATTTCTTCGGATCCGTTCGCCGATCCTTGGTGTTTCTTACTCCCGACGGCGACGATGGAGGGCGGTTCGGTGGCCTGGTCGAGAAGATCGGCTCGAGCATCCGCAAATCTCGAAATGGACTCTTCTCTAAGCATTCCGTGAGGGCTCTGCCTCCAGTTATGAAGGAAGACGCACCTCCGATTTGGTGGCGGAGGGGAGAGTTGATCGGATGCGGTGCTTTTGGTCGTGTTTATATGGGGATGAATCTAGATTCTGGAGAGCTTCTTGCGGTCAAACAAGTCTCAATTGCTGCTAATAGTGCTTCGAGGGAGAAAGCACAAGCTCACATACGGGAGCTGGAGGAGGAAGTGAAGCTTTTGAAGAATCTTTCTCACCCCAATATCGTGAGATATCTGGGAACTACCAGAGGGGAAGATTCATTAAATATTCTACTGGAGTTTGTTCCTGGAGGATCCATATCATCTCTGTTAGGGAAATTTGGATCTTTCCCCGAGTCTGTTATAAGAACCTACACGAAGCAGCTTTTATTGGGGCTCGAGTACCTTCATAAGAACGGCATTATGCATAGGGATATAAAGGGTGCAAACATTCTTGTAGACAATAAGGGGTGTATTAAACTTGCAGATTTTGGTGCATCTAAGAAAGTGGTTGAGCTGGCAACTATAAATGGAGCCAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGTTTCCCTGCTGATATATGGAGTGTAGGCTGTACTGTTATTGAAATGGCAACTGGGAAGCCTCCATGGAGCCAACAGTATCAAGAGGTTGCTGCTCTTTTCCATATAGGGAATACTAAGTCCCATCCGCCCATTCCTGAGCATCTATCTGCTGAGGCAAAAGATTTTCTGTTAAAATGTTTGCAAGAGGAGCCAAACTCAAGGCCTACTGCATCAGACTTGCTGCAGCATCCATTTGTATCATGTGAGTATCAAGATCCTCATGCAGCAGTCCGTGCCTCTTCTGTGGAATCTGGGAAACAGATGGTTGGCTCTGGGTTGAATTCTAATGATCTAGCAAATTCGACAATCCAACGTTCAACCTGCGTGGGCTTAAAGGATATTTGTGAAATGGGTAGCTTGAGGTGCTCTTCTGTTTATTCAGGGAACTACACGTCGCAGTCCAATTGGGGCTCAAGCAATTTTGAGGAGGACATGTGTCAGATAGATGATAAAGATCTGTTGGTTAGTCCATCGATAAAGTACAAATCTATTATATCGTCAAGCGATTTGAATAAGAGTTTCAATCCTATGTGTGAACCCACCGATGATGACTGGGCATGTAAATTGGATGGGAGCTCAGAGTTGGGAGGCAATTTAATGGACTTGTCTGGAATTCAAACTAGCCAGGAAACTACTTGTAAGGAGAATGACTTTACTTTTCCATGTGGTCAATCAGCAGTTGAGGATGATGAAGAAGTTACTGAGTCAAAGATTAGAGCCTTCCTGGATGAAAAGGCTATAGAACTGAAGAAGATGCAAACACCTTTATACGAAGAGTTCCGCAGCACAATTAATGCAGCTAATGCTTTAGGAGCAGTTGGAACTGAGAATAGCAAGAGTGTATCTAATTTCTTGAAATTGCCTCCCAAATGTGGGTCACCAAGTAAGCTGCGTGGTAAAAGACTCTCATCAATTGATGCTAGTAACTGTTCCAGCCGTCAGAGTCGCATAAAACAAGCTAGTATATTGGAAGATCGAGCTCTGCAGGAAATTCAATCGCCTCAGCTTGGTGAATGGAACAAATTGCTTCACACGCAGCCAGAATCTTCCACGCCAAGTTTCTCTGAGAGACAAAGGAAATGGAAAGAAGAGCTTGAGGAAGAACTTAAAAGGAAGCGAGAAATGATGCGCAGAGGAATTGTATGA 1929 44.43 MQDFFGSVRRSLVFLTPDGDDGGRFGGLVEKIGSSIRKSRNGLFSKHSVRALPPVMKEDAPPIWWRRGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASREKAQAHIRELEEEVKLLKNLSHPNIVRYLGTTRGEDSLNILLEFVPGGSISSLLGKFGSFPESVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFPADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGNTKSHPPIPEHLSAEAKDFLLKCLQEEPNSRPTASDLLQHPFVSCEYQDPHAAVRASSVESGKQMVGSGLNSNDLANSTIQRSTCVGLKDICEMGSLRCSSVYSGNYTSQSNWGSSNFEEDMCQIDDKDLLVSPSIKYKSIISSSDLNKSFNPMCEPTDDDWACKLDGSSELGGNLMDLSGIQTSQETTCKENDFTFPCGQSAVEDDEEVTESKIRAFLDEKAIELKKMQTPLYEEFRSTINAANALGAVGTENSKSVSNFLKLPPKCGSPSKLRGKRLSSIDASNCSSRQSRIKQASILEDRALQEIQSPQLGEWNKLLHTQPESSTPSFSERQRKWKEELEEELKRKREMMRRGIV 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14888068 14893273 - MC07g0705 Mch7g1086 693424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1086 642 Coils Coil 616 639 - -
Mch7g1086 642 SUPERFAMILY Protein kinase-like (PK-like) 65 328 IPR011009 -
Mch7g1086 642 CDD STKc_MAPKKK 65 327 - -
Mch7g1086 642 FunFam Mitogen-activated protein kinase kinase kinase 2 64 355 - -
Mch7g1086 642 Gene3D Transferase(Phosphotransferase) domain 1 65 362 - -
Mch7g1086 642 ProSiteProfiles Protein kinase domain profile. 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1086 642 Pfam Protein kinase domain 67 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1086 642 FunFam Serine/threonine-protein kinase STE11 62 155 - -
Mch7g1086 642 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 329 IPR050538 -
Mch7g1086 642 SMART serkin_6 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1086 642 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524(InterPro)
Mch7g1086 642 Coils Coil 98 125 - -
Mch7g1086 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0539 Mch-Chr2:3790771 Mch7g1086 Mch-Chr7:14888068 8.41E-53 dispersed
Mch4g0251 Mch-Chr4:1645099 Mch7g1086 Mch-Chr7:14888068 5.50E-48 dispersed
Mch7g1086 Mch-Chr7:14888068 Mch8g2856 Mch-Chr8:31430138 5.03E-253 dispersed
Mch9g1973 Mch-Chr9:21102582 Mch7g1086 Mch-Chr7:14888068 2.09E-16 dispersed
Mch1g1655 Mch-Chr1:17432345 Mch7g1086 Mch-Chr7:14888068 4.85E-16 transposed
Mch4g1422 Mch-Chr4:17685206 Mch7g1086 Mch-Chr7:14888068 6.89E-44 transposed
Mch4g1440 Mch-Chr4:17872410 Mch7g1086 Mch-Chr7:14888068 6.89E-44 transposed
Mch6g2600 Mch-Chr6:27824461 Mch7g1086 Mch-Chr7:14888068 1.12E-34 transposed
Mch8g2084 Mch-Chr8:23835410 Mch7g1086 Mch-Chr7:14888068 5.78E-66 transposed
Mch7g1086 Mch-Chr7:14888068 Mch8g2907 Mch-Chr8:31847432 3.07E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77557 PF00069 Pkinase 2.80E-72 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1086 K20606 - csv:101217427 1121.69