Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1108 ATGCAGGCCGATCAGAGAAGAAAGTCATCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAGGTAATTGGTAAAGGAAGTTACGGTGTTGTTTGCTCTGCATATGATTCTCATACTGGGGAGAAAGTTGCAATAAAGAAAATCAATGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAGCTTTTAAGACTATTGAGACATCCGGACATTGTGGAGATAAAGCACATCTTACTACCTCCATCTAGAAGGGAATTCAAGGACATATATGTCGTGTTTGAGCTCATGGAATCTGATCTTCACCAAGTTATCAAAGCAAATGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCATGAAATATATACACACAGCAAATGTCTTCCACCGGGACCTAAAACCCAAAAATATCTTAGCAAATGCTGATTGCAAACTCAAGATCTGTGACTTTGGTCTAGCAAGAGTTGCTTTTAACGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACGAGGTGGTACAGAGCTCCTGAACTGTGTGGTTCATTTTTCTCAAAGTATACACCGGCAATAGATATATGGAGCATTGGTTGCATCTTTGCGGAGCTTTTAACTGGAAAACCGCTTTTCCCTGGAAAAAATGTTGTTCACCAATTAGATTTGATGACAGATTTTCTGGGAACTCCAAATGCAGAAGCCATTGCCAGGGTACGAAATGAGAAAGCCCGTCGATACCTAAGCAGCATGAGAAAGAAGAAGCCCGTTCCGTTCTCCCATAAGTTTCCTCATGCAGATCCACTTGCACTTCGCTTATTAGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCGGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCTAAGGTTGAGAGAGAACCATCTGCTCAACCTGTTACTAAGATGGAATTTGAATTTGAAAGACGAAGGATAACCAAAGAAGATGTTAGGGAGCTTATTTACAGGGAGATTCTCGAGTACCATCCGAAGATGTTAAAGGAATACTTAGATGGCTCAGAACCTACTGGTTTCATGTATCCAAGTGCAGTTGACCATTTTAAGAAGCAATTTGCCTACCTTGAGGAGCACTATGGAAATGGCGCAACTGTTGCTCCTCCTGAAAGACAGCATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGACAACATGGTGCAGAACCCGGCACAAGTCGCGAATGACCTATCCAAATGTTCCATCAAAGAAGTCGAGAGGCCACAAGTGGATAGGAGTTGCAATATTCCTTTGACTAGAGTTCCTATTCAAGTTCCTCAATCTATCCAAGGCAATGCTGCAAGGCCCGGTAAAGTCGTTGGCTCTGTGTTGCGATATAACAACTGTGGAACAGCGGCAGCAGTAGCACCAGAAGTTATTGAACAGCGGAGAATGACCCGAAACCCTTCTGTTCCACCACAGTACGCCACTAATAACTGTTCATATCCACGAAGAAACTCATCCTGTAAAAACGAAAGGGCTGAAGATGAAGCCATTGAAGGTCCAAATGGGTTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCTCAAGGTGGACCAGGAAATAACTGGTAC 1695 42.77 MQADQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDSHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSHKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEYLDGSEPTGFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRPCVLYSDNMVQNPAQVANDLSKCSIKEVERPQVDRSCNIPLTRVPIQVPQSIQGNAARPGKVVGSVLRYNNCGTAAAVAPEVIEQRRMTRNPSVPPQYATNNCSYPRRNSSCKNERAEDEAIEGPNGLQPKPQYIARKVAAAQGGPGNNWY 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15054923 15060658 + MC07g0725 Mch7g1108 693446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1108 565 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Mch7g1108 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch7g1108 565 MobiDBLite consensus disorder prediction 502 544 - -
Mch7g1108 565 FunFam Mitogen-activated protein kinase 15 119 - -
Mch7g1108 565 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Mch7g1108 565 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1108 565 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Mch7g1108 565 FunFam Mitogen-activated protein kinase 111 339 - -
Mch7g1108 565 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Mch7g1108 565 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1108 565 MobiDBLite consensus disorder prediction 504 524 - -
Mch7g1108 565 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1108 565 CDD STKc_TDY_MAPK 24 361 - -
Mch7g1108 565 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0720 Mch-Chr2:4907398 Mch7g1108 Mch-Chr7:15054923 4.60E-260 dispersed
Mch4g0061 Mch-Chr4:437982 Mch7g1108 Mch-Chr7:15054923 1.34E-250 dispersed
Mch4g0128 Mch-Chr4:846200 Mch7g1108 Mch-Chr7:15054923 5.40E-51 dispersed
Mch6g0417 Mch-Chr6:2759523 Mch7g1108 Mch-Chr7:15054923 2.40E-254 dispersed
Mch7g1108 Mch-Chr7:15054923 Mch9g1264 Mch-Chr9:14505988 3.02E-236 dispersed
Mch7g1108 Mch-Chr7:15054923 Mch9g0834 Mch-Chr9:6299304 1.69E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77558 PF00069 Pkinase 6.70E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1108 - - - 0.0