Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1117 ATGGGTTGTATCCATACAAAGTGTTGCTGTCGCTACCCAAAATCGTTGGTCGGAGAATCCCAAGACTTCAGGGAAGGAATTCCTTACTGTCTGCAAGATAAAAACACTCTGATAGAGAGATCATTGGAGTTTGTTCCTGTTTCTTCCCACAACTATCATTTGGAATACTTGGTACTGGCTCAGCGTGGTTTCTACCCAGAATCTCCTGATAAAGAAAACCAAGACAGTTTCTGCATTAGAAGAAATATACAAGGTAACCCAAATGCCCATTTCTTTGGTGTTTTTGATGGGCATGGCCAGTTTGGGATGCAGTGTTCAAATTTTGTTAAGGATAGGCTAATAGAAAAGCTGTGCAATGATCCCACATTGTTAGATGATCCTGTACAAGCTTACAATTCAGCATTCTTATCCACAAATGAGGAGTTGCATACAAGTGAGATTGATGATTCCATGAGTGGAACAACAGCAATTACAGTCCTTGTTGTTGGGGATACCCTCTATGTGGCCAATGTGGGTGATTCAAGGGCTGTAATTGCAGTTAAAGAAGGGAATTGTGTCCTTGGCAAGGACTTGTCAACTGATCAAACTCCATTTAGAAAGGATGAGTATGAGAGAGTGAAGCTTTGTGGGGCTAGAGTTCTGAGTGTTGATCAAGTGGAAGGACTTTTGGATCCTGATATTCAGTGCTGGGGTGATGAAGAAAGTCAGGGTGGCGACCCGCCTCGACTCTGGGTTCAAAATGGGTTGTATCCCGGGACTGCATTTACCAGGAGCATAGGTGATAGTACTGCAGAGAAGATCGGTGTAAACGCTGTTCCCGAGGTCTTAGTTCTTCAGCTTAACCCCAATCATCTTTTCTTTGTCGTCGCTAGCGATGGAGTTTTCGAGTTCCTTTCCAGTCAAACTGTTGTTGATATGGCATCAAGTTATGCAGATCCTCAAGATGCATGTACTGCTATCGCTGCCGAGTCATACAAACTGTGGATGGAACATGAAAATCGAACCGATGACATAACGATGATTATTGTTCATATCAAAGGCCTGTCTAATTCAGGCACCATCGCCATAGCTGGATCAAGCCAGATCAGCACCAGGCCTGTAGGATCAGGAGGAGGAATTGTCAAGAATTCCTCGAGCACTCAATTGGAGAGCACCTTTTCTTTAAGACGGTTTTTCAGATCCACTAAACTCTCAGCATGTCGTTTCAACAAATCAAAGCCCCGCAATCGTGGTTCCAGCTCTGAATAG 1248 43.83 MGCIHTKCCCRYPKSLVGESQDFREGIPYCLQDKNTLIERSLEFVPVSSHNYHLEYLVLAQRGFYPESPDKENQDSFCIRRNIQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVQAYNSAFLSTNEELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNCVLGKDLSTDQTPFRKDEYERVKLCGARVLSVDQVEGLLDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITMIIVHIKGLSNSGTIAIAGSSQISTRPVGSGGGIVKNSSSTQLESTFSLRRFFRSTKLSACRFNKSKPRNRGSSSE 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15125580 15129619 + MC07g0733 Mch7g1117 693455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1117 415 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169(InterPro)
Mch7g1117 415 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Mch7g1117 415 Gene3D - 50 347 IPR036457 -
Mch7g1117 415 SUPERFAMILY PP2C-like 47 347 IPR036457 -
Mch7g1117 415 PANTHER PROTEIN PHOSPHATASE 61 344 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch7g1117 415 SMART PP2C_4 58 343 IPR001932 -
Mch7g1117 415 Pfam Protein phosphatase 2C 72 323 IPR001932 -
Mch7g1117 415 CDD PP2Cc 71 345 IPR001932 -
Mch7g1117 415 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0835 Mch-Chr6:5783066 Mch7g1117 Mch-Chr7:15125580 6.46E-135 dispersed
Mch7g1117 Mch-Chr7:15125580 Mch8g2798 Mch-Chr8:30983631 2.72E-23 dispersed
Mch5g0651 Mch-Chr5:4335453 Mch7g1117 Mch-Chr7:15125580 1.73E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1117 - - - 0.0