Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g1138 | ATGGCGCCTAAAGTGATCGTTGAATCAGGCTCGTCGATAGTGGATTTTGGGATGGAGTTGGTAGCGGATCATTCTTCGGTGGTTTCTTTAAACTTATTCGTAGCTCTTCTTTGCGGTTGTATTGTTGTCGGTCACTTATTGGAGGAGAATCGATGGATCAACGAGTCCATTACAGCCCTTGTTATTGGATTGTGTACCGGCATCATAATATTGCTAACAACCAGAGGGAAAAGCTCCCATTTATTTATGTTCAATGGAGAGCTTTTCTTTATTTATCTCCTTCCGCCCATCATTTTCAATGCCGGGTTCCAGGTGAAGAAGAAGCAATTTTTCCGCAACATCATGACAATCGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGTGCTTTGCACTTCTTCCAGAAAATGAATATCGGTTCCCTTGATCTTGGAGATTATCTAGCTATTGGAGCAATATTTTCTGCAACAGACTCTGTTTGCACTTTACAGGTTCTTAATCAGGATGAGACCCCTCTTTTGTATAGCCTGGTTTTTGGGGAGGGAGTAGTTAATGATGCCACATCGGTGGTGCTATTCAATGCAATCCAGAACTTTGATCTTTCTCACATGAATTCAAGCATTGTGCTGCAATTCATTGGAAATTTTTTGTATCTGTTTATTGCAAGTACTGTGCTGGGAATTTTAGTCGGCCTGCTTAGCGCATATATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGTGAGGTTGCTCTTATGATACTCATGGCGTACTTCTCTTATATGTTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCATTATACATGGCATAACGTGACTGAAAGTTCAAGAGTGACAACAAAGCATGCTTTTGCCACCCTTTCTTTCGTTGCCGAGATCTTCATCTTTCTCTACGTTGGCATGGATACTCTTGATATCGAGAAGTGGAGATTTGTTAGCCATAGTCCTGGGAAATCAATTGGGGTGAGCTCTATACTGTTGGGATTGGTTGTCGTTGGAAGAGCAGCCTTCGTTTTTCCTTTATCATTCTTGTCCAATCTGACCAAGAAATCTTCGCACGAGAAACTAAACTTGGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCTGTATCAATGGCGCTTGCATATAATCAGTTTACCAGGTCAGGCCACACCCATTTACCAGGCAATGCAATCATGATCACCAGTACCATCACAGTTGTTCTTTCCAGCACCGTGGTTTTCGGAATGATGACGAAACCGTTGATTGGGGTTTTGCTTCCCCAACCGAAATATTCGATGAGCATGCTCTCTTCCGAACCATCATCCCCCAAATCCTTCACTGTCCCACTCCTCTCCGATGACCGAAACGGCGCCGTCGCGTCTCCTCTGCGGCTGCTCCTCAGAATCCCCACCCATTCCGTACACCATTATTGGCGAAGATTCGACGACGCCTTCATGCGGCCGGTTTTTGGAGGGCGTGGGTTCGTCCCCTTCGTCCCTGGCTCGCCCACTGAAGATCAGGCCGCCGCTCAACAATGGCGGACGGAGGGACTCGAAGCCATTGATGACACCAAAACCATTCTTATACAAACTCCAAGGTAG | 1674 | 44.62 | MAPKVIVESGSSIVDFGMELVADHSSVVSLNLFVALLCGCIVVGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFMFNGELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIVLQFIGNFLYLFIASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDTLDIEKWRFVSHSPGKSIGVSSILLGLVVVGRAAFVFPLSFLSNLTKKSSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLSSTVVFGMMTKPLIGVLLPQPKYSMSMLSSEPSSPKSFTVPLLSDDRNGAVASPLRLLLRIPTHSVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTEDQAAAQQWRTEGLEAIDDTKTILIQTPR | 557 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 15254525 | 15261434 | - | MC07g0754 | Mch7g1138 | 693476 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g1138 | 557 | Gene3D | - | 150 | 201 | - | - | |
| Mch7g1138 | 557 | PRINTS | Na+/H+ exchanger signature | 102 | 116 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch7g1138 | 557 | PRINTS | Na+/H+ exchanger signature | 88 | 99 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch7g1138 | 557 | PRINTS | Na+/H+ exchanger signature | 157 | 167 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch7g1138 | 557 | PRINTS | Na+/H+ exchanger signature | 117 | 125 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch7g1138 | 557 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 27 | 540 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Mch7g1138 | 557 | Pfam | Sodium/hydrogen exchanger family | 34 | 445 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0723 | Mch-Chr3:11513209 | Mch7g1138 | Mch-Chr7:15254525 | 8.55E-43 | dispersed | |
| Mch7g1138 | Mch-Chr7:15254525 | Mch9g0802 | Mch-Chr9:6005704 | 1.77E-234 | dispersed | |
| Mch11g1230 | Mch-Chr11:8702967 | Mch7g1138 | Mch-Chr7:15254525 | 5.59E-204 | transposed | |
| Mch6g1633 | Mch-Chr6:18003274 | Mch7g1138 | Mch-Chr7:15254525 | 4.71E-276 | transposed | |
| Mch7g1138 | Mch-Chr7:15254525 | Mch9g0801 | Mch-Chr9:5992947 | 3.70E-243 | wgd |
Pathway information