Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1192 ATGTCCGGCGATGCTGGTGACCAGAAAAAGAAGAAAATTGCAGTCGTGAGCGTCTCCGCTCTGATCTTGGTGGCGATGGTGGTGGCTGTTGCCGTCGGTGTCAGTAACCCTCACGACGTCGATCACGATGACGGTCACGATACGGAGTCCGACGATGGCCACCAAATTACAACGTCGACAAAATCAATCAAATCCATCTGCCAACCCACTGATTACAAAGACGTTTGCGAAGAAAGCCTTGCGACGGAGGGCGTAACCGCGACGGACCCGAAAGAGTTGATCAAGTCGGCGTTCAAAATAGCCACGAATCACATAAACGCGGCGATTCAAAACTCCACGACTTTGAAAGAGCTGGCCAAAGATCCACGAGCCAACCAAGCCTTACAAAACTGCCGCGAGCTCCTCGAATACGCCATCGACGACATCAAAGAGTCGTTCGAACGAATCGGCACATTTGAAGTGGGCAAAGTCAAAGAGTTCATTGACGATTTAAAAATCTGGCTGACTGGTGCCTTGACCTACGAGGACACTTGTTTGGATGGGTTCGAGAACACCACCGGCGAAGCGGGCGAGAAAATGAGGCAGTTTTTGAAGTCGTCTCAACAACTTACCAGTAACAGTTTAGCCATGGTTACCGAATTGGCCAACAGTTTGGGCAATCTTCAGATTCCCACATTGGGCCGTCGGCTCATGGCCGAAAACGACGCCCCAGAATGGGTCAGCGACACCAATAGGCGACTGTTGCAGGCTGGGCCGGTGACGGTTAAGCCCAACGTAGTGGTAGCGCAGGACGGAAGTGGGAAATACAAGACCATTAATGAGGCTTTGGTTGAAATTCCCCAAAAGAGTAACGTCACGTTTGTGATCTACGTCAAGGCCGGTATTTATAAGGAAACTGTTGTCATTACGAATGCTATGACCCACGTCACCATGTACGGAGATGGCCCCACCAAAACCGTCGTCACTGGTAGCCTCAACTACATCGACGGTGTTCAAACTTTCAAGACCGCCACCTTCGCGACTATTGGTACCAATTTCTTTGCAAGAGATATGGGTTTCGAGAATAGCGCTGGGCCTGCGAAGCACCAGGCCGTGGCGCTGCGAGTCCAATCCGACAGATCGATCTTCTACAACTGTCGAATGGATGGATACCAAGACACGTTGTACGCACAGACTCACCGTCATTTCTATCGCGACTGCGTCATCACTGGCACCATCGACTTCGTGTTTGGAAACTCAGCCGCCATCTTCCAAAACTGCAAGCTAGTGGTCCGAAAGCCACTGGACAACCAGCAGTGCATCGTGACGGCTCATGGGCGGCTCGGGAAGCGTGAGCCGACTGCACTCGTGTTTCAGGGTTGTCATTTTACATCTGACCCAACGTACTACCCGCACCGAGCCGTGAACAAGGCGTACTTGGGGAGGCCATGGAAGGCATATTCTCGAACCATCATCATGCAGTCTCAAATCGACGACCTAATCCAACCCGAGGGATGGCTACCGTGGATGGGCAACTTTGGGCTGAACACATTGTTCTACGCTGAGTTGCAGAACACAGGACCGGGGGCAGACAAAAGCAAGAGAGTGAAGTGGCGCGGGATTAAAGAGATCACACCGAAACATGCCGTTGATTTCACCCCGAGACCCTTCATCGATGGTGACGCTTGGATCAAGCCTAAAGGAATCCCCTACTCATCTTACATGATGTAA 1710 51.58 MSGDAGDQKKKKIAVVSVSALILVAMVVAVAVGVSNPHDVDHDDGHDTESDDGHQITTSTKSIKSICQPTDYKDVCEESLATEGVTATDPKELIKSAFKIATNHINAAIQNSTTLKELAKDPRANQALQNCRELLEYAIDDIKESFERIGTFEVGKVKEFIDDLKIWLTGALTYEDTCLDGFENTTGEAGEKMRQFLKSSQQLTSNSLAMVTELANSLGNLQIPTLGRRLMAENDAPEWVSDTNRRLLQAGPVTVKPNVVVAQDGSGKYKTINEALVEIPQKSNVTFVIYVKAGIYKETVVITNAMTHVTMYGDGPTKTVVTGSLNYIDGVQTFKTATFATIGTNFFARDMGFENSAGPAKHQAVALRVQSDRSIFYNCRMDGYQDTLYAQTHRHFYRDCVITGTIDFVFGNSAAIFQNCKLVVRKPLDNQQCIVTAHGRLGKREPTALVFQGCHFTSDPTYYPHRAVNKAYLGRPWKAYSRTIIMQSQIDDLIQPEGWLPWMGNFGLNTLFYAELQNTGPGADKSKRVKWRGIKEITPKHAVDFTPRPFIDGDAWIKPKGIPYSSYMM 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15614141 15616086 - MC07g_new0392 Mch7g1192 693530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1192 569 NCBIfam pectinesterase inhibitor domain 59 214 IPR006501 GO:0004857(InterPro)
Mch7g1192 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 216 IPR035513 -
Mch7g1192 569 Pfam Pectinesterase 258 554 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch7g1192 569 CDD PMEI-like_3 65 216 - -
Mch7g1192 569 MobiDBLite consensus disorder prediction 38 54 - -
Mch7g1192 569 MobiDBLite consensus disorder prediction 38 57 - -
Mch7g1192 569 SMART PMEI_2 58 210 IPR006501 GO:0004857(InterPro)
Mch7g1192 569 FunFam Pectinesterase 59 215 - -
Mch7g1192 569 Pfam Plant invertase/pectin methylesterase inhibitor 61 210 IPR006501 GO:0004857(InterPro)
Mch7g1192 569 ProSitePatterns Pectinesterase signature 1. 283 302 IPR018040 -
Mch7g1192 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 214 IPR035513 -
Mch7g1192 569 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Mch7g1192 569 Gene3D - 252 568 IPR012334 -
Mch7g1192 569 FunFam Pectinesterase 252 568 - -
Mch7g1192 569 PANTHER PECTINESTERASE 11 559 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch7g1192 569 SUPERFAMILY Pectin lyase-like 254 566 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g1192 Mch-Chr7:15614141 Mch7g1198 Mch-Chr7:15643425 0 dispersed
Mch7g1192 Mch-Chr7:15614141 Mch7g1193 Mch-Chr7:15618878 0 tandem
Mch5g0733 Mch-Chr5:4939153 Mch7g1192 Mch-Chr7:15614141 1.81E-242 wgd
Mch7g1192 Mch-Chr7:15614141 Mch9g0696 Mch-Chr9:5226477 2.30E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1192 K01051 - csv:101221958 826.239