Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch7g1214 | ATGGATCTGAGCCACATAAAGGGATCGATGGCGACGCCGGCTCTAATTCCTGCTAGAAAAGCTACTGAAATGGTTTCCGATCAGTTCCCGGTGGGTCTTCGAGTTTTGGTTGTGGATGATGATCCAACCTGCCTCAGGATCTTGGAAAAGATGCTTCAAACTTGCCTCTACGCCGTAACAAAATGCAACCGGGCAGAGATCGCATTGTCGTTGCTTCGTGAGAACAGAAACGGGTTCGATATCGTCTTAAGCGATGTGCATATGCCAGACATGGATGGATTCAAACTTCTAGAGCAAGTTGGGCTGGAGATGGATTTGCCTGTTATCATGATGTCAGCGGATGATGGAAAGAATGTTGTGATGAAGGGAGTGATTCACGGTGCTTGCGATTACCTGATCAAACCTGTTCGGATAGAAGCGCTAAGGAACATATGGCAACACGTGGTTCGGAAGAGAAAGACCGAATGGAAGGATTTGGAGCAATCGGGGAGCGTGGAGGATGGAGATCGAGAGCAAAATCTATCTGAAGGTGCGAATTATTCGTCTTCGGCGTATGAAGGAAGTTGGAACAGCTCAAAGAGGAGGAGGGACGCTGAAGAAGAGCCCGAGGAGAGGGACGATACATCGACATTAAAGAAGCCTCGGGTGGTATGGTCAGTTGAGCTTCATCAACAGTTTGTTGTTGCTGTTAATCAACTAGGCATTGACAAGGCTGTTCCCAAAAAGATTCTGGAGTTGATGAATGTTCCCGGGCTAACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTATATCTTAGAAGGCTTAGTGGAGTATCGCCAAGTAATTTGAACAATTCTTTTATCAGCCCTCAAGAAGCAACTTTTGGGCCAATGGCTTCATTCAATGGGATCGATCTTCAGACGCTTTCGGTCGTGGGCCAACTCACGCCTCAGAGTATTGCTGCACTCCAAGCAACCGGGCTTCGTAGGTCGTCGGTAAAATCTAGCATATCCATGGCCCTTGTTGATCAGAACAACATATTCAGCTTTGAAAATCCAAAATTGAGGTTTGCTGAGGATCAAACACAACACCTGAATAACAGCAAACCAGTGAACTTGTTTCATGGAATTCCAACAAAAATGGAGCCAAAGCATCTTGCCAACATGCACCACCCTTCTGCACAGACTCAAGGGAACATAAACATGCAACTTATTGTCAAGAGTGAACATGGTGGAACTCAACTAATGCATTTGACTCAACAACAAGCTGGAGGACAGGCTCTAAATAACTCCCCTGCTAGCCACTTACCGCGAATTTCGTCAACGATAAGGAAGCCTATCATATCAAATGGCGTTACGAGGGGAAACGGGACTGCCGATGGACCGGGGTACAACCTTGTTTCGCCAGCATCATTGATGATGAACTTTCCAATGAACCAAACCACAGAACTGTCAAACAATTTTTCTCTTCAGAGTAATTCTTCGGTATCTACACTGACTTGTAACGGGGTGTTTCAAGAAGATATTAGTTCGGATCTAAAGGGATCGGGCGGACTAATGTCGAGTTATGATGTTTTTAATGACTTTCATCTGCAAAAATCCCATGACTGGGACTCTCAGAATGTAAGCAACTTGGCCTTTGGTAATTCTCACCATGGAAACTTCATACAGGATAGCTTTGATGTCTCGCCCTCGACTTTAATTCATAACGGTTTTCCTTTGAGCCGAACGAATGGACAAAACCAAAACATGTCAGTCGTTGGAAAGACTATATTTTCCTTTTCGGATGCTACTCAACCAGAGACTGCACAAAGTAACATTCAGAACTCGCTTCTCAATCCTGTGGAGGTTAAGACTCAGACAATTCCTGATGCAAGCTATCAAAGTGACCTCTTAGCTGAGAACTTTGGCCATGATGAACTTCTTAGTGTCTTCCTAAAACAACAACAAGGAGACAATGGATCGGTCGAGAGTGAGTTCGACTTTAGTGGATATCAAACCGAGAATATTTGCGTTTAG | 2007 | 44.74 | MDLSHIKGSMATPALIPARKATEMVSDQFPVGLRVLVVDDDPTCLRILEKMLQTCLYAVTKCNRAEIALSLLRENRNGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVEDGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPEERDDTSTLKKPRVVWSVELHQQFVVAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPSNLNNSFISPQEATFGPMASFNGIDLQTLSVVGQLTPQSIAALQATGLRRSSVKSSISMALVDQNNIFSFENPKLRFAEDQTQHLNNSKPVNLFHGIPTKMEPKHLANMHHPSAQTQGNINMQLIVKSEHGGTQLMHLTQQQAGGQALNNSPASHLPRISSTIRKPIISNGVTRGNGTADGPGYNLVSPASLMMNFPMNQTTELSNNFSLQSNSSVSTLTCNGVFQEDISSDLKGSGGLMSSYDVFNDFHLQKSHDWDSQNVSNLAFGNSHHGNFIQDSFDVSPSTLIHNGFPLSRTNGQNQNMSVVGKTIFSFSDATQPETAQSNIQNSLLNPVEVKTQTIPDASYQSDLLAENFGHDELLSVFLKQQQGDNGSVESEFDFSGYQTENICV | 668 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15730654 | 15736848 | + | MC07g0815 | Mch7g1214 | 693552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch7g1214 | 668 | MobiDBLite | consensus disorder prediction | 190 | 210 | - | - | |
Mch7g1214 | 668 | ProSiteProfiles | Response regulatory domain profile. | 34 | 149 | IPR001789 | GO:0000160(InterPro) | |
Mch7g1214 | 668 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 30 | 380 | IPR045279 | GO:0009736(InterPro) | |
Mch7g1214 | 668 | Pfam | Myb-like DNA-binding domain | 215 | 265 | IPR001005 | - | |
Mch7g1214 | 668 | FunFam | Two-component response regulator | 33 | 170 | - | - | |
Mch7g1214 | 668 | MobiDBLite | consensus disorder prediction | 174 | 189 | - | - | |
Mch7g1214 | 668 | SMART | REC_2 | 33 | 145 | IPR001789 | GO:0000160(InterPro) | |
Mch7g1214 | 668 | SUPERFAMILY | CheY-like | 32 | 157 | IPR011006 | - | |
Mch7g1214 | 668 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 212 | 269 | IPR017930 | - | |
Mch7g1214 | 668 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 213 | 266 | IPR006447 | GO:0003677(InterPro) | |
Mch7g1214 | 668 | SUPERFAMILY | Homeodomain-like | 210 | 270 | IPR009057 | - | |
Mch7g1214 | 668 | Pfam | Response regulator receiver domain | 35 | 143 | IPR001789 | GO:0000160(InterPro) | |
Mch7g1214 | 668 | Gene3D | - | 210 | 272 | - | - | |
Mch7g1214 | 668 | FunFam | Two-component response regulator | 209 | 272 | - | - | |
Mch7g1214 | 668 | PIRSF | RR_ARR_type-B | 15 | 658 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Mch7g1214 | 668 | Gene3D | - | 33 | 167 | - | - | |
Mch7g1214 | 668 | MobiDBLite | consensus disorder prediction | 159 | 210 | - | - | |
Mch7g1214 | 668 | MobiDBLite | consensus disorder prediction | 159 | 173 | - | - | |
Mch7g1214 | 668 | CDD | REC_typeB_ARR-like | 35 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g1369 | Mch-Chr4:17053407 | Mch7g1214 | Mch-Chr7:15730654 | 1.22E-20 | dispersed | |
Mch6g0639 | Mch-Chr6:4371040 | Mch7g1214 | Mch-Chr7:15730654 | 1.07E-69 | dispersed | |
Mch7g0718 | Mch-Chr7:11829684 | Mch7g1214 | Mch-Chr7:15730654 | 9.10E-34 | dispersed | |
Mch7g0796 | Mch-Chr7:12608728 | Mch7g1214 | Mch-Chr7:15730654 | 1.78E-51 | dispersed | |
Mch7g1214 | Mch-Chr7:15730654 | Mch8g0075 | Mch-Chr8:417170 | 4.63E-85 | dispersed | |
Mch1g0471 | Mch-Chr1:9156443 | Mch7g1214 | Mch-Chr7:15730654 | 6.06E-23 | transposed | |
Mch3g0205 | Mch-Chr3:2662966 | Mch7g1214 | Mch-Chr7:15730654 | 4.20E-23 | transposed | |
Mch5g1325 | Mch-Chr5:14125354 | Mch7g1214 | Mch-Chr7:15730654 | 1.38E-23 | transposed | |
Mch5g0747 | Mch-Chr5:5033128 | Mch7g1214 | Mch-Chr7:15730654 | 1.64E-264 | wgd | |
Mch7g1214 | Mch-Chr7:15730654 | Mch9g0687 | Mch-Chr9:5174082 | 4.66E-16 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43740 | PF00072 | Response_reg | 1.40E-21 | CL0304 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch7g1214 | K14491 | - | csv:101210138 | 1112.83 |