Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1214 ATGGATCTGAGCCACATAAAGGGATCGATGGCGACGCCGGCTCTAATTCCTGCTAGAAAAGCTACTGAAATGGTTTCCGATCAGTTCCCGGTGGGTCTTCGAGTTTTGGTTGTGGATGATGATCCAACCTGCCTCAGGATCTTGGAAAAGATGCTTCAAACTTGCCTCTACGCCGTAACAAAATGCAACCGGGCAGAGATCGCATTGTCGTTGCTTCGTGAGAACAGAAACGGGTTCGATATCGTCTTAAGCGATGTGCATATGCCAGACATGGATGGATTCAAACTTCTAGAGCAAGTTGGGCTGGAGATGGATTTGCCTGTTATCATGATGTCAGCGGATGATGGAAAGAATGTTGTGATGAAGGGAGTGATTCACGGTGCTTGCGATTACCTGATCAAACCTGTTCGGATAGAAGCGCTAAGGAACATATGGCAACACGTGGTTCGGAAGAGAAAGACCGAATGGAAGGATTTGGAGCAATCGGGGAGCGTGGAGGATGGAGATCGAGAGCAAAATCTATCTGAAGGTGCGAATTATTCGTCTTCGGCGTATGAAGGAAGTTGGAACAGCTCAAAGAGGAGGAGGGACGCTGAAGAAGAGCCCGAGGAGAGGGACGATACATCGACATTAAAGAAGCCTCGGGTGGTATGGTCAGTTGAGCTTCATCAACAGTTTGTTGTTGCTGTTAATCAACTAGGCATTGACAAGGCTGTTCCCAAAAAGATTCTGGAGTTGATGAATGTTCCCGGGCTAACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTATATCTTAGAAGGCTTAGTGGAGTATCGCCAAGTAATTTGAACAATTCTTTTATCAGCCCTCAAGAAGCAACTTTTGGGCCAATGGCTTCATTCAATGGGATCGATCTTCAGACGCTTTCGGTCGTGGGCCAACTCACGCCTCAGAGTATTGCTGCACTCCAAGCAACCGGGCTTCGTAGGTCGTCGGTAAAATCTAGCATATCCATGGCCCTTGTTGATCAGAACAACATATTCAGCTTTGAAAATCCAAAATTGAGGTTTGCTGAGGATCAAACACAACACCTGAATAACAGCAAACCAGTGAACTTGTTTCATGGAATTCCAACAAAAATGGAGCCAAAGCATCTTGCCAACATGCACCACCCTTCTGCACAGACTCAAGGGAACATAAACATGCAACTTATTGTCAAGAGTGAACATGGTGGAACTCAACTAATGCATTTGACTCAACAACAAGCTGGAGGACAGGCTCTAAATAACTCCCCTGCTAGCCACTTACCGCGAATTTCGTCAACGATAAGGAAGCCTATCATATCAAATGGCGTTACGAGGGGAAACGGGACTGCCGATGGACCGGGGTACAACCTTGTTTCGCCAGCATCATTGATGATGAACTTTCCAATGAACCAAACCACAGAACTGTCAAACAATTTTTCTCTTCAGAGTAATTCTTCGGTATCTACACTGACTTGTAACGGGGTGTTTCAAGAAGATATTAGTTCGGATCTAAAGGGATCGGGCGGACTAATGTCGAGTTATGATGTTTTTAATGACTTTCATCTGCAAAAATCCCATGACTGGGACTCTCAGAATGTAAGCAACTTGGCCTTTGGTAATTCTCACCATGGAAACTTCATACAGGATAGCTTTGATGTCTCGCCCTCGACTTTAATTCATAACGGTTTTCCTTTGAGCCGAACGAATGGACAAAACCAAAACATGTCAGTCGTTGGAAAGACTATATTTTCCTTTTCGGATGCTACTCAACCAGAGACTGCACAAAGTAACATTCAGAACTCGCTTCTCAATCCTGTGGAGGTTAAGACTCAGACAATTCCTGATGCAAGCTATCAAAGTGACCTCTTAGCTGAGAACTTTGGCCATGATGAACTTCTTAGTGTCTTCCTAAAACAACAACAAGGAGACAATGGATCGGTCGAGAGTGAGTTCGACTTTAGTGGATATCAAACCGAGAATATTTGCGTTTAG 2007 44.74 MDLSHIKGSMATPALIPARKATEMVSDQFPVGLRVLVVDDDPTCLRILEKMLQTCLYAVTKCNRAEIALSLLRENRNGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVEDGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPEERDDTSTLKKPRVVWSVELHQQFVVAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPSNLNNSFISPQEATFGPMASFNGIDLQTLSVVGQLTPQSIAALQATGLRRSSVKSSISMALVDQNNIFSFENPKLRFAEDQTQHLNNSKPVNLFHGIPTKMEPKHLANMHHPSAQTQGNINMQLIVKSEHGGTQLMHLTQQQAGGQALNNSPASHLPRISSTIRKPIISNGVTRGNGTADGPGYNLVSPASLMMNFPMNQTTELSNNFSLQSNSSVSTLTCNGVFQEDISSDLKGSGGLMSSYDVFNDFHLQKSHDWDSQNVSNLAFGNSHHGNFIQDSFDVSPSTLIHNGFPLSRTNGQNQNMSVVGKTIFSFSDATQPETAQSNIQNSLLNPVEVKTQTIPDASYQSDLLAENFGHDELLSVFLKQQQGDNGSVESEFDFSGYQTENICV 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15730654 15736848 + MC07g0815 Mch7g1214 693552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1214 668 MobiDBLite consensus disorder prediction 190 210 - -
Mch7g1214 668 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160(InterPro)
Mch7g1214 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 380 IPR045279 GO:0009736(InterPro)
Mch7g1214 668 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Mch7g1214 668 FunFam Two-component response regulator 33 170 - -
Mch7g1214 668 MobiDBLite consensus disorder prediction 174 189 - -
Mch7g1214 668 SMART REC_2 33 145 IPR001789 GO:0000160(InterPro)
Mch7g1214 668 SUPERFAMILY CheY-like 32 157 IPR011006 -
Mch7g1214 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Mch7g1214 668 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677(InterPro)
Mch7g1214 668 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Mch7g1214 668 Pfam Response regulator receiver domain 35 143 IPR001789 GO:0000160(InterPro)
Mch7g1214 668 Gene3D - 210 272 - -
Mch7g1214 668 FunFam Two-component response regulator 209 272 - -
Mch7g1214 668 PIRSF RR_ARR_type-B 15 658 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Mch7g1214 668 Gene3D - 33 167 - -
Mch7g1214 668 MobiDBLite consensus disorder prediction 159 210 - -
Mch7g1214 668 MobiDBLite consensus disorder prediction 159 173 - -
Mch7g1214 668 CDD REC_typeB_ARR-like 35 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1369 Mch-Chr4:17053407 Mch7g1214 Mch-Chr7:15730654 1.22E-20 dispersed
Mch6g0639 Mch-Chr6:4371040 Mch7g1214 Mch-Chr7:15730654 1.07E-69 dispersed
Mch7g0718 Mch-Chr7:11829684 Mch7g1214 Mch-Chr7:15730654 9.10E-34 dispersed
Mch7g0796 Mch-Chr7:12608728 Mch7g1214 Mch-Chr7:15730654 1.78E-51 dispersed
Mch7g1214 Mch-Chr7:15730654 Mch8g0075 Mch-Chr8:417170 4.63E-85 dispersed
Mch1g0471 Mch-Chr1:9156443 Mch7g1214 Mch-Chr7:15730654 6.06E-23 transposed
Mch3g0205 Mch-Chr3:2662966 Mch7g1214 Mch-Chr7:15730654 4.20E-23 transposed
Mch5g1325 Mch-Chr5:14125354 Mch7g1214 Mch-Chr7:15730654 1.38E-23 transposed
Mch5g0747 Mch-Chr5:5033128 Mch7g1214 Mch-Chr7:15730654 1.64E-264 wgd
Mch7g1214 Mch-Chr7:15730654 Mch9g0687 Mch-Chr9:5174082 4.66E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43740 PF00072 Response_reg 1.40E-21 CL0304 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1214 K14491 - csv:101210138 1112.83