Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1243 ATGCTCCGGGGATTGATGAATCTGCTCTCTCTTTGCTGGAAGCCGTTCGGGCATGCTACTGATGATTTGAGCTCTGTTGGAGTTATCGGAACCAATTGCGGTGGAAAAGACAGTAAGGATAGCTTGCTCTGGTTCTATGATTACGGTAAGTATGGTTCCGGAGAATTTTCCATGGCTGTCGTACAGGCCAACCAGGTGCTTGAGGACCAGTCCCAGATTGAATCTGGTCCTTTTGGCACCTTCCTCGGAATCTACGATGGCCACGGCGGGCCCGACGCCGCCAGATACGTCTGCGATAACTTGTTTAGGCGTTTCCAAGATGAAGAACGAGGAGTCGTGACTCGTGAAACCATTCTGAATGCGTTTCGTCAAACAGAGGAAGGGTTCACAACTGTCGTGTCTGAGCTGTGGAGTACTCGGCCTCAGATAGCAACAGTTGGGACATGCTGTCTAGTAGGGGTGATACATGAGCAGACACTTTACGTGGCGAGTCTTGGAGATTCTCGTGCTGTGCTAGGGAAGAAAGTTGGCAACACTGAAGAGATTGCTGCCATTCAATTATCAACAGAGCATAATGCAAATCTTGAGGATATAAGGCATGAATTGAAAGATATGCATCCAAATGATCCTCAAATTGTAGTTCAAAGGCATGGAGTTTGGAGAGTGAAAGGCATTATTCAGGTTTCTAGATCCATTGGAGATGTCTATATGAAACATGCTAGGTATAATACCGAACGAATCAATACGAAATTTAGACTTCCCGAACCAATGAATATGCCCATATTGACTGCTGTACCTACGATTATTGCTCATCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCCTCCGATGGACTTTGGGAACACCTAACCAATGAAAAAGCAGTTGATATTGTTCATAATCATCCTCGTGCAGGAAGTGCAAAAAGGCTCGTGAAGGCAGCCCTTCAAGAAGCAGCTAGAAAACGAGAGATGCGGTATTCGGATCTCCGAAAGATCGATAAGAAGGTTCGGCGTCATTTTCACGATGACATTAGTGTTATTGTTTTATTTTTCAACCACGACCTTATAGCCAGAAGCAACGTCCTCCTAGATCAGCCATTATCGGTCCGAAGTGCCCTCGATCATTGA 1134 45.33 MLRGLMNLLSLCWKPFGHATDDLSSVGVIGTNCGGKDSKDSLLWFYDYGKYGSGEFSMAVVQANQVLEDQSQIESGPFGTFLGIYDGHGGPDAARYVCDNLFRRFQDEERGVVTRETILNAFRQTEEGFTTVVSELWSTRPQIATVGTCCLVGVIHEQTLYVASLGDSRAVLGKKVGNTEEIAAIQLSTEHNANLEDIRHELKDMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYMKHARYNTERINTKFRLPEPMNMPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLIARSNVLLDQPLSVRSALDH 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15956850 15961010 + MC07g0843 Mch7g1243 693581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1243 377 Gene3D - 47 362 IPR036457 -
Mch7g1243 377 SMART PP2C_4 49 351 IPR001932 -
Mch7g1243 377 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Mch7g1243 377 SUPERFAMILY PP2C-like 64 354 IPR036457 -
Mch7g1243 377 CDD PP2Cc 56 353 IPR001932 -
Mch7g1243 377 ProSiteProfiles PPM-type phosphatase domain profile. 52 353 IPR001932 -
Mch7g1243 377 Pfam Protein phosphatase 2C 80 320 IPR001932 -
Mch7g1243 377 FunFam Probable protein phosphatase 2C 42 46 361 - -
Mch7g1243 377 PANTHER PROTEIN PHOSPHATASE 53 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1801 Mch-Chr5:18398076 Mch7g1243 Mch-Chr7:15956850 3.85E-130 dispersed
Mch7g1243 Mch-Chr7:15956850 Mch9g1618 Mch-Chr9:18342636 4.39E-134 dispersed
Mch7g1243 Mch-Chr7:15956850 Mch1g1618 Mch-Chr1:17234809 6.15E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1243 K01102 - csv:101207284 705.286