Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1246 ATGGCGTCGTCTCTTCTTTCGAGCTCCGATCGCGCGCGGGAGCCTTCTCGGAAGCAGAAGAAGAAGAAAAACCATGGCAACAGAGACCATCATCACAACCAGAGCCAGAACCATATCAAATGGAAGTCCCAAACTCAGCAACAAATCTACTCCTCCAAGCTGGTACGAGCATTGAATCAAGTGAGGCTGAGTCCTTCCAACGAGGCGCCGCGCCGGGGCAGAGCCGTACGCGAGGCCGCCGACAGAGTCCTCGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGTCGTGCCATCCTGACGAACCGGCTCAAGCTCAAGTTCAGGAAGCCCAAGAGGCAGAGAGCATCCACCGCCGGAAACAGCCGCTCAAAGAAACCGAGAGTCAGCGTATTGCGGCTGAAAGGGAAGTCGTTACCGGCGGTGCAAAGGAAAGTTCGGGTTCTTGGACGGCTGGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCGACCGATTACATAGCTGCACTTGAAATGCAAGTTCGGGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTCGCCGGCACTACCTCCGCCCCGCCAAGTTGA 612 58.01 MASSLLSSSDRAREPSRKQKKKKNHGNRDHHHNQSQNHIKWKSQTQQQIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRASTAGNSRSKKPRVSVLRLKGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSVAGTTSAPPS 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15974242 15975459 + MC07g0846 Mch7g1246 693584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1246 203 CDD bHLH_AtIBH1_like 130 185 IPR044549 GO:0006355(InterPro)
Mch7g1246 203 MobiDBLite consensus disorder prediction 108 128 - -
Mch7g1246 203 MobiDBLite consensus disorder prediction 1 46 - -
Mch7g1246 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 188 IPR044660 GO:0006355(InterPro)
Mch7g1246 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 192 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2769 Mch-Chr6:29141378 Mch7g1246 Mch-Chr7:15974242 3.99E-46 dispersed
Mch5g0778 Mch-Chr5:5308372 Mch7g1246 Mch-Chr7:15974242 7.13E-73 wgd
Mch7g1246 Mch-Chr7:15974242 Mch8g2764 Mch-Chr8:30739376 2.54E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1246 - - - 0.0