Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1247 ATGGAGAAGAAAGAAGAGGTGTTAAAGAGAGAGAATTCGAATTCGAATTCCATGGGAAATAATTCTGGCATGATATTCTCCGATGCGATTCCCACGTCCATGTTCGACATGCCGTTCGACGCCACCGATCAGTCGTTTAAGGCCTCCAGCTTCTTAGACCTCTTGGCCATCCAAGATTACAGCCCTTCTTTATTCGATCTCTTCTCTACGCCGCTGCCGGCGCCGGCGCCGTCGTCATCAGCCGTGGCGGAGTCCTCGGAGGTTTTGAATACTCCACCAACTCCCAACTCCCCCTCCGTGTCTTGCTCCTCCAACGAAGATGACGTGGATCGGGATAAGACCCCTCCTCACACGAACAGCAAACAGTTATTGAAAGCGAAAAAGAAGAATCAGAAAAGGGCAAGAGAGCCGAGATTCGCGTTCATGACGAAGAGCGAAGTGGATCAGCTGGACGACGGTTATCGGTGGCGGAAGTACGGTCAAAAAGCGGTAAAAAATAGCCCTTATCCCCGGAGCTACTACCGGTGCACCACCGCCGGCTGCGGCGTCAAGAAGCGAGTGGAGCGCTCCTCCGACGACCCCTGCATCGTCGTCACCACTTACGAGGGCCACCACACGCATCAGAGCCCCGTCATGCCACGTGGAGCCCTGTCATCCATTCCCCAGTACACTACCCCGCCGCCGCCGCAGCAGCGCCTTGTTTTCCCACAGCCGCAATATCTATACACTCCGGCGCCGCCTGTGGACATTGACATTGCCACGTGCGGCGGCGGCGGCTTCCATCCCAATAATAATCCGAGATTTGCAGATGATCAAGAACGACGTCGCATCGGCGCATCGTCAAATTCCTTCAAAGACCACGGACTTCTGCAGGATATGATCGTACCGTCGAGCCTTCACATCCCGAAACAAGAGTAG 918 54.79 MEKKEEVLKRENSNSNSMGNNSGMIFSDAIPTSMFDMPFDATDQSFKASSFLDLLAIQDYSPSLFDLFSTPLPAPAPSSSAVAESSEVLNTPPTPNSPSVSCSSNEDDVDRDKTPPHTNSKQLLKAKKKNQKRAREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPCIVVTTYEGHHTHQSPVMPRGALSSIPQYTTPPPPQQRLVFPQPQYLYTPAPPVDIDIATCGGGGFHPNNNPRFADDQERRRIGASSNSFKDHGLLQDMIVPSSLHIPKQE 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15992564 15995469 + MC07g0847 Mch7g1247 693585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1247 305 FunFam WRKY transcription factor 57 136 210 - -
Mch7g1247 305 MobiDBLite consensus disorder prediction 12 27 - -
Mch7g1247 305 MobiDBLite consensus disorder prediction 75 104 - -
Mch7g1247 305 SMART WRKY_cls 150 209 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch7g1247 305 ProSiteProfiles WRKY domain profile. 145 210 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch7g1247 305 MobiDBLite consensus disorder prediction 1 27 - -
Mch7g1247 305 MobiDBLite consensus disorder prediction 75 137 - -
Mch7g1247 305 Gene3D WRKY domain 125 211 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch7g1247 305 MobiDBLite consensus disorder prediction 259 285 - -
Mch7g1247 305 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 216 IPR044810 GO:0003700(InterPro)
Mch7g1247 305 MobiDBLite consensus disorder prediction 267 281 - -
Mch7g1247 305 Pfam WRKY DNA -binding domain 151 208 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch7g1247 305 SUPERFAMILY WRKY DNA-binding domain 142 210 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0722 Mch-Chr2:4928813 Mch7g1247 Mch-Chr7:15992564 2.18E-39 dispersed
Mch6g1412 Mch-Chr6:12571243 Mch7g1247 Mch-Chr7:15992564 3.09E-27 dispersed
Mch7g1247 Mch-Chr7:15992564 Mch8g1391 Mch-Chr8:10352924 6.73E-35 dispersed
Mch5g0008 Mch-Chr5:68392 Mch7g1247 Mch-Chr7:15992564 3.84E-33 transposed
Mch6g1298 Mch-Chr6:10735900 Mch7g1247 Mch-Chr7:15992564 8.29E-06 transposed
Mch8g0554 Mch-Chr8:3987029 Mch7g1247 Mch-Chr7:15992564 4.51E-31 transposed
Mch5g0780 Mch-Chr5:5334212 Mch7g1247 Mch-Chr7:15992564 6.69E-58 wgd
Mch7g1247 Mch-Chr7:15992564 Mch8g2124 Mch-Chr8:24315307 2.89E-46 wgd
Mch7g1247 Mch-Chr7:15992564 Mch9g0642 Mch-Chr9:4818780 9.42E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43745 PF03106 WRKY 9.30E-26 CL0274 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1247 - - - 0.0