Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1248 ATGGCCAAGTATCCGACTTCCCATCTTTGTCTAATAATGTTTGAGCTTATTGCAATCGTGTCTGCGAACATGCAAGCGTCCTATGGAGGAGGGTATGAAAACCAGCCACCGTTTGGCACGCCCCCTGCCTGCCCAGAGGCAGAAGCCATCATCTTCTCTTGGGTCCAAACGGCGATCACAGAGGACCCCCGAATGGCAGCATCTCTATTACGCCTCCACTTCCACGACTGCTTTGTCAATGAAAGTCTTTGGTGCGACGCTTCGGTGTTGCTGGATGACAATGAGAACTTTGTGGGCGAAAAAACTGCAGCTCCAAACGTGAACTCACTGAGGGGATTTGAAGTGATCGATGCTATAAAATCAGAGATCGAATCTGTGTGCCCACAGACAGTTTCATGTGCAGACATTCTAGCAATTGCGGCCAGAGACAGTGTTGCACTTTCTGGCGGACCCGTTTGGAAAGTGGAATTTGGAAGAGGAGATGGCCTCAGCGCCAGCAAATCAGCAGCACAGAACAATATTCCTGGCCCAAACTCCACTGTGCCCATTCTCGTCTCTAAATTCCAGAATCTGGGCCTTTCTCTCACAGATATGGTTGCTCTCTCAGGGGCACACACGCTGGGAAAAGCACGATGTGTTTCGTTCAGTTCTAGGCTGCAAGCAAGTGGGGACAGTCCCCATGAAGGTGCAAACCGAGAGTTCATCGAGTCGCTGAAACAGCTGTGCTCGGAGTTTGATAGCACCTCGACATTGGCACAGCTTGACCTTGTAACCCCGGTGACGTTCGACAACCAGTACTACATTAATCTTCTTTCTGGAGAAGGGTTGCTGCAGTCTGATCAGGTTCTCGTGACCGGGGATTACCAAACAAGGGAAATAGTCGAAACCTACGCTGTAGACCCAGTTGCCTTCTTTGAAGACTTCAAGACATCGATGATCAAAATGGGAAGCCTAAAACCACCAACTGGAGTAAAGACCACGATCCGAACCAACTGTCGAACCATAAGC 1008 49.8 MAKYPTSHLCLIMFELIAIVSANMQASYGGGYENQPPFGTPPACPEAEAIIFSWVQTAITEDPRMAASLLRLHFHDCFVNESLWCDASVLLDDNENFVGEKTAAPNVNSLRGFEVIDAIKSEIESVCPQTVSCADILAIAARDSVALSGGPVWKVEFGRGDGLSASKSAAQNNIPGPNSTVPILVSKFQNLGLSLTDMVALSGAHTLGKARCVSFSSRLQASGDSPHEGANREFIESLKQLCSEFDSTSTLAQLDLVTPVTFDNQYYINLLSGEGLLQSDQVLVTGDYQTREIVETYAVDPVAFFEDFKTSMIKMGSLKPPTGVKTTIRTNCRTIS 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15998632 15999918 + MC07g0848 Mch7g1248 693586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1248 336 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 Pfam Peroxidase 54 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 FunFam Peroxidase 41 181 - -
Mch7g1248 336 CDD secretory_peroxidase 44 333 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch7g1248 336 Gene3D Peroxidase, domain 2 175 316 - -
Mch7g1248 336 PANTHER PEROXIDASE 72-RELATED 42 334 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 ProSiteProfiles Plant heme peroxidase family profile. 32 336 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 FunFam Peroxidase 175 315 - -
Mch7g1248 336 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
Mch7g1248 336 SUPERFAMILY Heme-dependent peroxidases 43 334 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch7g1248 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Mch7g1248 336 Gene3D - 43 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g1248 Mch-Chr7:15998632 Mch9g2030 Mch-Chr9:21534314 3.35E-79 dispersed
Mch7g1248 Mch-Chr7:15998632 Mch10g0764 Mch-Chr10:5342204 2.47E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1248 K00430 - csv:101205763 565.844