Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1263 ATGGTAGCTGAAGCAGAGATCATATGCCCGCAAACCCTTTCTGTGATGAACGTCAACTATCATCTTCGCGTAACCGAAGAACGCGATCTTCAGATCGATTTGCCGCACCCTTCTTCGTCTCCTATATTTCCCGAGGCAGTTAGTTGTTCAGATATCATTGAAGATGCCCATATAGAGTCAACTGCCATAGAATTTGTTCCAACTATTCGTTCTGGTAGCTATGCAGACATTGGAGCTCGAGACTCTATGGATGATGAACATGTCTGCATTGATGATCTGTCTACCCACCTCAGATTTATGTTCCAGTGTGCTATGCCCAGTGGTTTCTATGCTGTTTTTGATGGTCATGGAGGACCTCACGCAGCTGCTTTTGTCAAGAGGAATGCAGTGAGATTATTTTTTGAAGATGCTGATTGGTTAAAAATGCTAGATACTAATCCTATCTCCTTGAAAGATGTGGAGAATTCTCATCGCAAAGCCTTTCTACTAGCAGATCTTGCCTTAGCCAATGAGCAAAGTGTTAGCAGCTCATGTGGGACAACTGCATTGACGGCATTGGTTCTTGGAAGGCATTTGCTTGTTGCAAATGCTGGTGACTGCCGAGCAGTCTTATGTAGGAAAGGTGTAGCAGTTGCAATGTCTCAAGATCACAGGCCTTCTAATTTGCTTGAGCTCAAGCGGGTAGAAGGGATGGGTGGGTTTGTAGATGACGGGTATCTTAATGGCTATATTTCAGTAACCCGAACCTTGGGGGATTGGGACCTGAAATTGCCAAATGGCTCCTCATCACCTCTGATTGCCGAGCCACAAGTGGAGCATGTTATTTTAACAAAGGACGATGAGTTCTTGATCCTTGGCTGCGACGGGATTTGGGATGTTATGTCAAGCCAATATGCTGTCAGTCTTGTTCGACGTGGGTTGAGGAAGCACAATGACCCACATCAAAGTTCCCGAGAATTAGTCCTAGAAGCTTTGCGACTTAATACATCTGATAATCTTACTGCAATTGTGATCTGTTTTTCTTCTTCCAGCTGCGTTCCTCAGCAGCGAATATGGAAGTCGTGTTGTCTGACAGAAGAGGCTAGAAGTAGATTGAGGAGCTTGTTAGAAGGAAACTGA 1119 44.68 MVAEAEIICPQTLSVMNVNYHLRVTEERDLQIDLPHPSSSPIFPEAVSCSDIIEDAHIESTAIEFVPTIRSGSYADIGARDSMDDEHVCIDDLSTHLRFMFQCAMPSGFYAVFDGHGGPHAAAFVKRNAVRLFFEDADWLKMLDTNPISLKDVENSHRKAFLLADLALANEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGVAVAMSQDHRPSNLLELKRVEGMGGFVDDGYLNGYISVTRTLGDWDLKLPNGSSSPLIAEPQVEHVILTKDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSRELVLEALRLNTSDNLTAIVICFSSSSCVPQQRIWKSCCLTEEARSRLRSLLEGN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16115789 16121224 - MC07g0861 Mch7g1263 693601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1263 372 SMART PP2C_4 60 338 IPR001932 -
Mch7g1263 372 Pfam Protein phosphatase 2C 78 332 IPR001932 -
Mch7g1263 372 CDD PP2Cc 69 340 IPR001932 -
Mch7g1263 372 Gene3D - 55 345 IPR036457 -
Mch7g1263 372 SUPERFAMILY PP2C-like 63 341 IPR036457 -
Mch7g1263 372 SMART PP2C_SIG_2 85 340 IPR001932 -
Mch7g1263 372 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169(InterPro)
Mch7g1263 372 ProSiteProfiles PPM-type phosphatase domain profile. 70 340 IPR001932 -
Mch7g1263 372 FunFam Probable protein phosphatase 2C 22 54 343 - -
Mch7g1263 372 PANTHER PROTEIN PHOSPHATASE 2C 68 340 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g1263 Mch-Chr7:16115789 Mch9g0624 Mch-Chr9:4663637 7.90E-133 dispersed
Mch7g1263 Mch-Chr7:16115789 Mch8g3003 Mch-Chr8:32638254 3.06E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43746 PF00481 PP2C 3.70E-64 CL0238 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1263 K14803 - csv:101207477 649.047