Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch7g1272 ATGTTGGTTAATCTGAGGAGAGGACCTCTGCATACACTAAATACCAATTTATCGACCCATCTGGGAACTGAATCTGCTGCATTGACCAGAAGCGAATTCTACTGCTTATTCAGAAACGCTTCTTTGTATACTAGAGAAAAAGAAATGGCGCCTGATCTAAACACAACGCTTTCCAGGAGGACGTTTGTTTTTGGTATGAAGGTATGGGTATTTACTGGAATCCTGGTGGGGGTGTTTATTGTAATAGTCCTTGTGTTGCTATCAATATGTGTTACTTCACGAAGGAAGTCCAGAAGGGTTAGTGGCATGCTTCCTCTCAGCCGTATTCCCACTGCATCAAAGGAAATTAAGGAGATTGGAGTGGATCATGTTTCAGCGATCAAACATGATGGGTTCGACAAATTTGGCGACACAGAGTCGGAAAAGGTTCTTCTGTATTCAAACAAGGCGTATAACTGCAGCATATCAGGCTCAGTTGATCACACAGAGGTAGATGCAAGCAAGGAAGCAAGTGGCCTGCATAGACCTTCGGATCCATTATCACCGGACCCTGCGCCACTGTCTGGTCTGCCGGAATTCTCTCAACTAGGATGGGGTCACTGGTTCACCTTAAGAGACCTGGAAGTTGCAACTATGCATTTTGCAAACGACAATATAATTGGGGAGGGAGGATATGGGGTTGTTTATCGAGGACTTATCAATGGGACACCTGTGGCTGTCAAAAAGCTCTTAAGTCTAGGACAAGCGGAAAGGGAATTCAGAGTGGAAGTGGAAGCATTTGGGCATGTGCGGCATAAGAACTTAGTTCGCCTGCTGGGTTACTGCATTGAAGGAACTCACAGGATACTAGTATATGAGTATGTGGACAATGGGAATCTAGAGCAGTGGCTTCATGGAGCTCTACGTCAGCATGGATATCTCACTTGGGAGGCACGAATCAAAATTCTCCTTGGAACAGCTAAGGCGCTGGCGTATTTGCACGAGGCAATTGAACCAAAAATTGTGCATCGAGATATCAAGGCAAGCAACATATTGATTGATGATGAGTTTAATGCAAAGCTATCAGACTTTGGGCTAGCCAAATTACTTGGTGCTGGGAAAAGTCATATTACCACCAGGGTAATGGGTACGTTTGGATATGTGGCGCCAGAATATGCCAAATCTGGGCTTCTAAATGAGAAGAGCGACGTTTATAGCTTTGGAGTGGTCCTTTTGGAAGCAATTACTGGGAGAGAACCTGTTGATTATGGCCGCCCGACACATGAGGTAAATTTGGTGGATTGGCTAAAGCTGATGGTAGGAAGCAAGCAGTCAGAAGAGGTGGTTGACCCAAATATAGAGAGAAGGCCATCAGTTAGTGAACTGAAGCGAGTTCTTTTGACTGCTTTGAGGTGTGTGGATCCAGATGCTGATAAGAGGCCTAAGATGAGCCAAGTTGCTCGCATGCTCGAGTCCGAGGAATATCCAATTCCTCGACAGGATAGGAAACCCAGAAAGGATCATGCTATTGCAACTAAAAAGGAGGCTGAGAAACAGGAGAGAGGACCCAGACGGCACAGATAA 1563 45.36 MLVNLRRGPLHTLNTNLSTHLGTESAALTRSEFYCLFRNASLYTREKEMAPDLNTTLSRRTFVFGMKVWVFTGILVGVFIVIVLVLLSICVTSRRKSRRVSGMLPLSRIPTASKEIKEIGVDHVSAIKHDGFDKFGDTESEKVLLYSNKAYNCSISGSVDHTEVDASKEASGLHRPSDPLSPDPAPLSGLPEFSQLGWGHWFTLRDLEVATMHFANDNIIGEGGYGVVYRGLINGTPVAVKKLLSLGQAEREFRVEVEAFGHVRHKNLVRLLGYCIEGTHRILVYEYVDNGNLEQWLHGALRQHGYLTWEARIKILLGTAKALAYLHEAIEPKIVHRDIKASNILIDDEFNAKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAKSGLLNEKSDVYSFGVVLLEAITGREPVDYGRPTHEVNLVDWLKLMVGSKQSEEVVDPNIERRPSVSELKRVLLTALRCVDPDADKRPKMSQVARMLESEEYPIPRQDRKPRKDHAIATKKEAEKQERGPRRHR 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16185821 16189834 - MC07g_new0405 Mch7g1272 693610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch7g1272 520 FunFam serine/threonine-protein kinase PBS1-like 190 287 - -
Mch7g1272 520 SUPERFAMILY Protein kinase-like (PK-like) 198 492 IPR011009 -
Mch7g1272 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch7g1272 520 MobiDBLite consensus disorder prediction 470 520 - -
Mch7g1272 520 Gene3D Transferase(Phosphotransferase) domain 1 288 498 - -
Mch7g1272 520 MobiDBLite consensus disorder prediction 166 186 - -
Mch7g1272 520 SMART serkin_6 214 460 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1272 520 Pfam Protein kinase domain 216 480 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1272 520 ProSiteProfiles Protein kinase domain profile. 214 489 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch7g1272 520 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524(InterPro)
Mch7g1272 520 PANTHER OS01G0323000 PROTEIN 49 510 IPR052232 -
Mch7g1272 520 CDD STKc_IRAK 220 484 - -
Mch7g1272 520 FunFam Putative receptor-like serine/threonine-protein kinase 288 499 - -
Mch7g1272 520 Gene3D Phosphorylase Kinase; domain 1 195 287 - -
Mch7g1272 520 MobiDBLite consensus disorder prediction 487 520 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0723 Mch-Chr2:4932723 Mch7g1272 Mch-Chr7:16185821 1.76E-176 dispersed
Mch4g0052 Mch-Chr4:379044 Mch7g1272 Mch-Chr7:16185821 4.27E-181 dispersed
Mch5g0414 Mch-Chr5:2808800 Mch7g1272 Mch-Chr7:16185821 1.28E-146 dispersed
Mch7g1272 Mch-Chr7:16185821 Mch8g0674 Mch-Chr8:4797631 1.19E-154 dispersed
Mch7g1272 Mch-Chr7:16185821 Mch8g2748 Mch-Chr8:30661916 5.13E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77562 PF00069 Pkinase 4.60E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch7g1272 - - - 0.0